Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005530.1 Hibiscus syriacus cultivar Beakdansim tig00012787_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  255786

Tables:   1   2   

This is table  2  of  2  ( 133 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
219717--219767
24
2.1
24
81
0
57
23
25
21
29
1.99
224334--224415
30
2.7
30
81
10
105
34
14
4
46
1.66
224365--224421
29
1.9
30
85
3
80
33
21
5
40
1.75
225809--225869
23
2.7
23
84
0
68
29
24
24
21
1.99
225832--225876
23
2.0
23
90
0
72
24
26
28
20
1.99
225893--226105
103
2.1
103
95
0
381
36
23
14
26
1.93
231011--231079
23
3.0
23
77
8
77
28
24
24
21
1.99
231095--231307
103
2.1
103
94
0
372
36
24
14
24
1.93
232637--232696
20
2.9
21
90
7
95
18
26
25
30
1.98
239795--239881
41
2.1
41
93
0
147
47
9
11
32
1.71
250192--250249
29
2.0
29
100
0
116
31
27
6
34
1.83
254074--254219
76
1.9
75
94
1
256
30
17
21
30
1.97
254634--254677
17
2.6
17
77
0
52
40
6
11
40
1.68

Tables:   1   2

The End!