Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005532.1 Hibiscus syriacus cultivar Beakdansim tig00012796_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51393

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
554--664
58
1.9
58
80
7
127
42
3
20
33
1.70
17263--17300
19
2.0
20
84
5
51
60
7
0
31
1.25
18295--18328
3
10.7
3
87
12
50
64
0
35
0
0.94
21843--21868
6
4.3
6
100
0
52
34
34
0
30
1.58
37964--38019
23
2.4
23
96
0
103
35
33
5
25
1.79
38295--38347
18
2.9
18
73
15
56
54
3
0
41
1.18
38738--38782
2
22.5
2
100
0
90
48
0
0
51
1.00
45351--45386
3
12.3
3
94
5
65
33
0
0
66
0.92
45505--45549
20
2.2
20
80
0
54
55
0
0
44
0.99
49739--49812
32
2.3
33
88
9
116
40
32
10
16
1.83
49814--49876
33
1.9
33
83
6
83
39
23
4
31
1.76
50316--50360
21
2.1
21
95
0
81
60
0
0
40
0.97

Tables:   1

The End!