Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005543.1 Hibiscus syriacus cultivar Beakdansim tig00012837_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44573

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7826--7876
25
2.2
24
86
10
70
43
7
1
47
1.43
12889--12955
29
2.4
28
77
7
82
52
1
2
43
1.25
15465--15643
20
8.9
20
73
12
125
40
21
21
17
1.92
15549--15656
40
2.7
40
92
0
180
37
23
22
16
1.93
15523--15643
60
2.0
61
90
6
192
37
23
22
17
1.94
15527--15656
20
6.4
20
78
8
138
36
24
21
16
1.94
15767--15793
6
4.5
6
100
0
54
33
51
14
0
1.43
16548--16586
6
6.5
6
100
0
78
0
15
51
33
1.44
16732--17043
20
15.6
19
77
12
225
16
20
24
39
1.91
16697--17042
40
8.8
40
82
9
365
16
20
23
39
1.91
26137--26207
20
3.5
20
84
3
81
35
29
9
25
1.88
26543--26613
20
3.4
21
83
12
85
25
11
28
35
1.90
28514--28582
29
2.4
29
95
0
120
60
2
7
28
1.38
30012--30063
15
3.5
15
78
7
61
46
0
0
53
1.00
31179--31205
10
2.7
10
100
0
54
22
0
7
70
1.12
31204--31247
18
2.4
18
100
0
88
36
0
0
63
0.95
32158--32214
17
3.2
17
79
13
62
75
0
5
19
0.99
32153--32237
17
4.7
18
71
25
56
75
0
5
18
1.00
32199--32245
23
2.0
23
92
8
78
78
0
6
14
0.93
32189--32243
10
5.1
10
78
22
58
78
0
3
18
0.90
32158--32266
34
3.2
33
82
11
107
73
0
7
18
1.12
32297--32415
4
30.5
4
71
20
56
73
4
3
19
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32335--32388
11
4.8
11
84
10
74
79
3
1
14
0.95
32532--32579
15
3.0
16
79
14
55
72
0
0
27
0.84
32532--32579
8
6.0
8
79
16
55
72
0
0
27
0.84
32520--32577
23
2.5
24
81
13
59
74
1
1
22
1.01
32525--32579
20
2.7
21
81
16
71
72
0
1
25
0.94
33713--33778
31
2.1
31
82
0
78
34
7
7
50
1.59
35690--35792
51
2.0
50
84
1
134
20
29
29
21
1.98
38810--38852
3
14.3
3
80
0
50
4
34
27
32
1.78
40961--40999
20
2.0
19
90
5
60
43
0
23
33
1.54
43792--43867
39
1.9
40
91
2
127
31
26
3
38
1.75

Tables:   1

The End!