Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005547.1 Hibiscus syriacus cultivar Beakdansim tig00012841_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56440

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1789--1826
2
19.0
2
94
0
67
50
0
2
47
1.15
2262--2313
25
2.0
26
96
3
97
40
0
26
32
1.57
11695--11756
30
2.1
29
93
3
106
25
19
16
38
1.92
12406--12463
22
2.6
22
78
8
55
75
3
5
15
1.11
12477--12598
2
61.0
2
100
0
244
50
0
0
50
1.00
13662--13700
2
20.0
2
94
5
71
48
0
0
51
1.00
30818--30871
27
2.0
27
100
0
108
44
22
18
14
1.86
46816--47220
51
7.7
55
83
6
323
24
23
18
33
1.97
46867--47229
51
7.0
51
85
5
442
25
23
17
33
1.96
46867--47227
105
3.5
105
79
9
441
25
23
17
33
1.96
46867--47227
156
2.3
156
87
3
521
25
23
17
33
1.96
46867--47284
156
2.7
154
82
8
495
25
23
17
32
1.97

Tables:   1

The End!