Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005552.1 Hibiscus syriacus cultivar Beakdansim tig00012871_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76759

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7248--7302
16
3.4
16
92
0
83
27
3
21
47
1.68
10908--10953
17
2.6
17
82
3
56
34
8
30
26
1.86
12030--12120
23
4.0
23
86
0
128
29
26
26
17
1.98
19734--19773
21
1.9
21
90
10
64
2
32
2
62
1.22
28011--28038
7
4.0
7
100
0
56
28
14
14
42
1.84
31679--31723
15
3.1
15
87
3
65
33
0
22
44
1.53
32378--32466
40
2.3
39
88
2
124
21
16
24
37
1.94
36421--36450
8
3.6
8
95
4
51
83
0
0
16
0.65
37011--37053
19
2.1
21
87
8
63
55
13
0
30
1.39
37020--37210
77
2.6
75
86
5
246
57
12
0
30
1.36
38158--38239
31
2.6
31
90
0
119
25
10
14
48
1.76
38246--38346
10
9.1
10
69
19
58
61
18
8
10
1.54
38256--38346
23
3.9
23
81
8
112
61
19
8
9
1.53
38273--38354
13
6.7
13
68
26
54
62
21
7
8
1.49
38287--38355
23
3.0
23
81
12
79
63
20
5
10
1.45
39475--39608
67
2.0
69
92
2
227
35
12
12
39
1.82
52363--52421
30
2.0
30
96
0
109
28
6
32
32
1.83
52837--53117
139
2.0
139
95
0
508
30
13
16
39
1.88
62145--62287
70
2.0
72
97
2
272
38
8
12
40
1.73
64939--64990
23
2.4
22
74
6
61
46
5
3
44
1.45

Tables:   1

The End!