Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005553.1 Hibiscus syriacus cultivar Beakdansim tig00012873_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60684

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8466--8610
72
2.0
72
97
0
272
38
8
13
40
1.74
10047--10074
12
2.3
12
100
0
56
14
0
7
78
0.95
11305--11352
23
2.1
22
84
3
60
43
6
4
45
1.48
22470--22517
23
2.1
23
84
0
60
47
18
6
27
1.72
25506--25542
19
1.9
19
89
10
58
21
29
21
27
1.99
31999--32043
21
2.1
21
87
0
63
15
24
28
31
1.96
37196--37229
4
8.5
4
100
0
68
26
47
0
26
1.53
38008--38032
10
2.5
10
100
0
50
40
8
44
8
1.63
58787--58831
20
2.2
21
80
11
58
46
2
0
51
1.13
58799--58836
20
1.9
20
94
0
67
42
0
2
55
1.14
58799--58841
20
2.2
20
87
4
61
39
0
4
55
1.20

Tables:   1

The End!