Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005557.1 Hibiscus syriacus cultivar Beakdansim tig00012884_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55697

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10362--10413
23
2.3
23
86
3
70
32
26
21
19
1.97
10399--10456
21
2.8
21
86
5
64
36
27
17
18
1.94
10984--11034
19
2.5
20
81
9
59
25
31
15
27
1.96
14954--14991
17
2.4
17
86
8
53
71
15
5
7
1.28
16681--16705
12
2.1
12
100
0
50
40
16
8
36
1.77
17722--17750
14
2.1
14
100
0
58
51
13
0
34
1.42
24676--24712
19
1.9
19
89
10
58
40
0
2
56
1.13
25024--25064
20
2.0
20
95
0
73
48
9
17
24
1.76
25223--25297
38
2.0
37
84
5
98
48
4
1
46
1.29
32830--32896
33
2.0
33
100
0
134
14
43
17
23
1.87
38927--38970
2
22.0
2
95
0
79
50
2
0
47
1.13
40752--41574
6
139.2
6
96
3
1530
33
0
16
50
1.46

Tables:   1

The End!