Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005562.1 Hibiscus syriacus cultivar Beakdansim tig00012901_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63159

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7791--7825
19
1.9
18
88
11
54
45
14
22
17
1.84
8153--8396
54
4.5
54
87
4
339
34
20
17
28
1.95
8153--8397
108
2.3
108
89
1
375
33
20
17
28
1.95
17630--17678
19
2.6
19
84
9
57
24
28
20
26
1.99
22214--22261
23
2.1
23
100
0
96
37
4
14
43
1.65
23486--23585
44
2.3
41
75
9
101
30
26
21
23
1.99
26124--26283
65
2.5
63
86
6
214
29
23
20
26
1.99
27287--27313
9
3.0
9
100
0
54
44
22
11
22
1.84
33663--33699
15
2.4
16
90
4
58
48
2
45
2
1.30
37918--37945
14
2.0
14
100
0
56
64
0
7
28
1.20
41469--41511
20
2.2
20
83
8
52
67
16
0
16
1.24
48645--48701
22
2.6
21
81
10
69
15
19
5
59
1.55
56523--56610
7
10.9
8
77
13
76
82
1
12
3
0.84
56575--56613
1
39.0
1
89
0
60
94
0
5
0
0.29
56523--56621
14
6.9
14
76
6
90
82
1
13
3
0.83
56523--56621
10
10.7
9
81
11
87
82
1
13
3
0.83
58887--58968
29
2.8
28
85
7
110
52
9
7
30
1.61
58838--58936
50
2.0
48
82
3
117
51
12
9
27
1.69
62990--63159
54
3.2
53
87
2
234
27
8
20
42
1.81

Tables:   1

The End!