Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005565.1 Hibiscus syriacus cultivar Beakdansim tig00012906_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39186

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
868--927
31
2.0
31
90
3
95
26
13
13
46
1.80
29552--29589
18
2.1
18
100
0
76
21
23
10
44
1.83
31646--31704
31
1.9
31
89
0
91
38
22
13
25
1.90
31730--31775
24
2.0
23
95
4
83
26
26
26
21
2.00
31750--31826
17
4.5
17
86
0
100
25
28
18
27
1.98
35145--35285
64
2.2
63
80
9
153
32
17
23
26
1.97
36199--36263
31
2.1
31
85
5
87
23
18
21
36
1.95
36240--36316
29
2.7
29
83
0
82
15
20
28
35
1.94
37510--37567
21
2.8
20
77
10
55
44
29
0
25
1.54
37891--37931
14
3.1
14
76
20
52
41
0
4
53
1.22

Tables:   1

The End!