Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005567.1 Hibiscus syriacus cultivar Beakdansim tig00012914_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59856

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--108
12
8.0
12
72
13
61
18
35
7
39
1.78
2607--2673
36
1.9
36
88
11
104
31
22
2
43
1.68
20300--20390
27
3.5
26
79
19
100
42
3
0
53
1.17
20302--20412
27
4.2
27
78
14
97
41
3
0
54
1.17
20951--20980
10
2.9
10
95
5
51
26
23
0
50
1.50
24180--24215
14
2.6
14
86
0
54
38
11
0
50
1.38
27009--27076
24
2.9
24
77
12
61
57
1
2
38
1.23
30949--31085
72
1.9
71
80
8
161
56
8
8
27
1.58
33178--33221
6
7.3
6
100
0
88
31
34
0
34
1.58
36200--36227
6
4.7
6
100
0
56
53
0
14
32
1.41
42008--42043
2
18.0
2
100
0
72
50
0
0
50
1.00
47705--47779
37
2.0
37
84
5
96
50
16
14
18
1.78
47808--47907
42
2.4
43
84
3
132
38
15
21
26
1.92
56059--56105
22
2.1
22
84
4
58
46
6
2
44
1.40

Tables:   1

The End!