Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000557.1 Hibiscus syriacus cultivar Beakdansim tig00001088_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57514

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4095--4177
24
3.4
24
93
1
139
30
25
27
16
1.97
23231--23263
2
16.5
2
93
0
57
51
0
48
0
1.00
26768--26908
8
17.6
8
90
0
210
25
18
24
31
1.98
26768--26909
16
8.9
16
97
0
266
25
18
24
31
1.97
26889--26998
36
3.1
36
93
0
175
18
19
31
30
1.95
26981--28383
4
351.2
4
99
0
2792
0
24
49
25
1.50
32892--32961
21
3.3
21
90
4
106
24
22
21
31
1.98
33489--33530
22
1.9
22
90
0
66
28
21
21
28
1.99
34956--34998
3
14.3
3
85
9
61
65
0
34
0
0.93
37919--38288
204
1.8
203
92
0
632
38
10
12
38
1.78
46402--46449
19
2.3
20
86
10
62
64
8
2
25
1.32
48260--48327
14
4.9
14
96
0
118
23
39
27
8
1.84
48310--48381
23
3.1
23
93
0
117
26
27
36
9
1.88
48333--48402
23
2.6
28
85
12
78
27
27
38
7
1.82
48435--48528
33
2.8
33
90
0
134
9
36
29
24
1.87
48439--48554
10
11.1
10
72
12
72
10
34
31
24
1.89
48506--48553
19
2.5
19
89
3
78
10
29
37
22
1.88
48591--48648
29
2.0
29
89
0
89
24
25
36
13
1.92
49773--49826
16
3.4
16
75
19
51
68
0
9
22
1.17
49798--49849
12
4.3
12
75
7
52
67
0
13
19
1.23
51737--52640
105
8.7
105
96
1
1592
22
18
26
32
1.97
51737--52640
417
2.2
417
94
2
1579
22
18
26
32
1.97

Tables:   1

The End!