Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000558.1 Hibiscus syriacus cultivar Beakdansim tig00001091_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  180436

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159920--160009
44
2.0
44
95
0
162
24
18
25
31
1.98
159927--160021
22
4.6
19
82
10
75
21
20
27
31
1.97
164407--164562
65
2.4
64
91
3
242
30
16
21
30
1.96
167200--167295
45
2.2
44
87
9
133
27
17
22
32
1.97
167211--167298
21
4.0
23
72
19
71
25
18
23
32
1.97
167220--167298
21
3.6
22
74
15
74
24
18
22
34
1.97
172919--172967
21
2.3
21
92
0
80
32
16
26
24
1.96
173027--173182
65
2.4
65
84
5
192
32
16
21
30
1.95
173607--173688
2
40.5
2
97
2
155
48
0
1
50
1.08
174205--174234
2
15.0
2
100
0
60
50
0
0
50
1.00
179236--179516
124
2.3
120
86
5
372
23
18
17
40
1.91
179436--180097
110
6.0
113
82
7
779
29
18
14
37
1.90

Tables:   1   2

The End!