Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005580.1 Hibiscus syriacus cultivar Beakdansim tig00012947_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98537

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1009--1074
32
2.1
33
91
5
109
18
24
6
51
1.68
6770--6799
15
2.0
15
93
0
51
26
20
50
3
1.64
9666--9710
23
2.0
23
86
0
63
26
26
26
20
1.99
11531--11575
21
2.1
21
83
0
54
15
22
28
33
1.95
14849--14893
23
2.0
23
86
0
63
26
26
26
20
1.99
14999--15049
25
2.0
26
96
3
95
33
23
23
19
1.97
16714--16758
21
2.1
21
87
0
63
15
24
28
31
1.96
25458--25487
15
2.1
14
93
6
51
30
0
0
70
0.88
31325--31817
22
22.5
22
88
0
727
41
0
10
47
1.41
37672--37710
2
19.5
2
100
0
78
48
0
0
51
1.00
37912--37952
17
2.4
18
92
8
68
56
2
4
36
1.34
37944--37993
21
2.4
21
93
0
82
40
12
10
38
1.76
39546--39580
15
2.4
15
95
4
63
0
17
0
82
0.66
40152--40202
12
4.2
12
75
7
50
58
3
0
37
1.16
40504--40568
30
2.2
30
97
0
121
33
15
13
36
1.87
42923--42952
13
2.2
14
94
5
53
36
13
16
33
1.88
45240--45293
20
2.8
18
81
13
63
61
5
5
27
1.41
45558--45599
18
2.3
19
83
8
59
61
0
2
35
1.09
48796--48900
24
4.4
24
86
0
129
40
19
11
28
1.86
48825--48920
48
2.0
48
82
8
115
43
19
13
22
1.86
50581--50614
18
1.9
17
88
5
50
64
5
0
29
1.17
58815--58848
18
1.9
17
88
5
50
64
5
0
29
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67047--67080
18
1.9
17
88
5
50
64
5
0
29
1.17
88711--88757
15
3.5
13
78
16
51
59
0
2
38
1.09
92028--92241
113
1.9
115
82
3
272
32
8
19
39
1.83
93073--93231
35
4.5
35
87
0
201
23
23
19
33
1.97
97593--97659
35
1.9
35
90
0
107
35
2
0
61
1.12

Tables:   1

The End!