Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005585.1 Hibiscus syriacus cultivar Beakdansim tig00012966_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59207

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5580--5613
2
17.0
2
93
0
59
47
0
2
50
1.16
8457--8510
28
2.0
28
85
7
76
44
1
1
51
1.22
14783--14840
29
1.9
31
93
6
102
27
20
5
46
1.72
19157--19201
21
2.1
21
88
8
65
64
0
0
35
0.94
23085--23183
52
1.9
52
85
6
139
47
6
9
37
1.60
25484--25540
29
2.0
29
89
0
87
38
21
24
15
1.92
26185--26404
114
1.9
115
83
0
280
28
16
23
31
1.96
27445--27722
33
8.2
33
92
4
360
19
28
23
28
1.98
27445--27741
36
8.6
35
95
1
331
20
28
23
27
1.99
29690--29718
14
2.1
14
100
0
58
86
0
13
0
0.58
29754--29899
60
2.4
60
82
6
163
33
18
4
43
1.71
29758--29924
60
2.8
60
81
7
162
32
20
4
41
1.74
30203--30245
22
2.0
22
85
0
59
46
0
2
51
1.13
32270--32324
17
3.2
17
69
19
51
36
0
21
41
1.54
32957--33008
17
3.2
17
69
20
56
50
23
11
15
1.76
38917--39002
37
2.3
39
80
13
99
48
1
3
46
1.26
38971--39018
18
2.7
18
80
9
62
54
4
0
41
1.20
39673--39706
17
2.0
17
88
0
50
64
2
0
32
1.08
46555--46590
18
1.9
19
88
5
56
19
5
13
61
1.52
52395--52455
23
2.7
23
89
0
95
26
27
26
19
1.99
52471--52792
103
3.1
103
97
0
617
36
22
13
27
1.91
53829--53874
20
2.3
20
84
0
56
36
13
4
45
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54236--54276
20
2.0
20
90
0
64
7
26
36
29
1.83
58210--58242
16
2.1
16
100
0
66
57
24
12
6
1.57
58307--58354
16
3.1
16
87
6
80
58
20
12
8
1.60
58309--58354
15
3.0
15
90
3
74
58
19
13
8
1.60
58717--58772
14
4.3
14
78
17
75
53
26
12
7
1.64
58707--58785
24
3.3
24
89
0
113
54
24
12
8
1.66
58704--58757
10
5.0
10
77
16
54
57
24
9
9
1.59

Tables:   1

The End!