Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005602.1 Hibiscus syriacus cultivar Beakdansim tig00013030_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70845

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
839--882
3
15.3
3
86
9
65
29
0
0
70
0.88
839--883
17
2.9
16
87
12
67
28
0
0
71
0.87
4180--4210
16
1.9
16
100
0
62
19
9
19
51
1.74
5365--5443
10
8.3
9
76
15
61
16
29
26
27
1.97
5385--5443
18
3.2
17
77
17
64
15
30
28
25
1.96
5364--5437
28
2.5
30
82
14
109
17
27
27
28
1.98
5365--5443
38
2.1
37
86
13
108
16
29
26
27
1.97
5447--5486
12
3.5
12
86
13
66
17
47
22
12
1.81
5440--5491
22
2.4
22
90
3
88
19
48
23
9
1.78
5439--5493
17
3.0
17
75
25
58
18
45
23
12
1.83
12663--12731
9
7.3
9
80
8
75
15
27
28
27
1.96
12662--12731
29
2.5
29
82
13
92
17
27
28
27
1.97
12727--12763
17
2.2
17
95
0
65
18
40
24
16
1.90
14930--14999
21
3.3
21
67
13
54
51
0
0
48
1.00
14933--15012
41
2.0
41
85
5
108
52
0
0
47
1.00
14930--15049
13
8.9
15
71
18
61
51
0
0
48
1.00
14933--15048
15
8.5
15
72
20
69
52
0
0
47
1.00
24660--24708
20
2.6
18
81
15
62
38
0
6
55
1.25
24665--24708
20
2.3
19
88
11
63
36
0
6
56
1.26
24753--24786
3
11.0
3
93
6
59
35
0
0
64
0.94
26621--26672
20
2.6
21
76
11
56
28
5
0
65
1.16
33485--33701
83
2.6
83
92
1
355
30
13
19
35
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36236--36290
22
2.5
22
93
0
101
34
10
14
40
1.81
36968--37730
76
10.0
76
97
0
1438
21
21
21
36
1.96
37882--37915
3
11.0
3
93
6
59
35
0
0
64
0.94
41661--41691
15
2.1
15
100
0
62
58
12
29
0
1.35
43157--43255
45
2.2
45
76
7
103
31
23
19
26
1.98
46146--46185
19
2.1
19
90
0
62
42
0
12
45
1.42
47911--47962
19
2.7
19
100
0
104
21
30
17
30
1.96
47847--48022
83
2.1
84
81
9
200
21
22
21
34
1.97
50576--50640
32
2.0
32
90
0
103
50
4
16
27
1.65
55474--55865
158
2.5
158
82
6
479
48
6
14
31
1.68
57850--57905
3
18.7
3
100
0
112
32
0
0
67
0.91
62731--62811
36
2.2
38
86
8
114
61
2
1
34
1.17
62731--62834
36
2.8
36
78
16
97
60
1
2
34
1.23
63626--63657
12
2.7
12
100
0
64
18
50
6
25
1.70
69109--69147
2
20.0
2
94
5
71
51
0
0
48
1.00
69661--69708
23
2.1
23
100
0
96
20
14
33
31
1.93

Tables:   1

The End!