Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005604.1 Hibiscus syriacus cultivar Beakdansim tig00013036_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76814

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3873--4023
76
2.0
78
83
10
195
42
3
10
43
1.58
11973--12035
10
6.2
10
85
5
74
82
14
3
0
0.79
11973--12035
11
6.3
10
83
8
67
82
14
3
0
0.79
19670--19777
32
3.4
32
86
0
135
22
33
21
23
1.97
25600--25660
32
1.9
32
86
0
86
21
32
19
26
1.97
29296--29329
5
6.8
5
93
0
50
76
0
0
23
0.79
29293--29346
16
3.4
16
79
5
56
70
0
5
24
1.08
30055--30139
35
2.5
33
78
14
93
54
5
10
29
1.58
30055--30182
32
3.9
32
80
11
102
51
5
12
30
1.62
34540--34590
5
10.2
5
100
0
102
39
0
19
41
1.52
35256--35307
2
26.5
2
96
3
97
50
0
0
50
1.00
37665--37942
29
9.4
29
69
14
140
39
5
2
52
1.36
37816--37944
59
2.2
58
80
2
143
35
3
4
56
1.36
37963--37987
2
12.5
2
100
0
50
52
0
0
48
1.00
37983--38036
23
2.3
24
75
12
58
61
1
3
33
1.25
37943--38039
42
2.3
41
79
10
99
58
1
4
36
1.24
38045--38083
19
2.1
19
85
9
53
35
0
15
48
1.45
45456--45507
26
2.0
26
85
7
70
32
5
11
50
1.62
57739--57794
27
2.1
27
100
0
112
37
3
25
33
1.73
58085--58170
37
2.3
38
85
4
120
18
30
13
37
1.90
59759--59980
108
2.1
108
97
0
417
25
19
16
38
1.92
70235--70536
42
7.3
42
81
3
317
35
16
17
29
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70233--70528
82
3.6
81
78
3
279
34
17
18
30
1.94
71460--71716
37
6.8
37
80
10
261
46
3
8
41
1.52
71460--71700
79
3.1
78
85
8
321
46
4
7
41
1.51
71729--71788
5
12.6
5
75
15
56
38
1
3
56
1.26
71727--71781
23
2.2
24
81
15
67
40
1
3
54
1.28
71726--71791
34
2.0
33
85
8
89
37
1
3
57
1.23
71745--71788
13
3.2
14
81
12
56
38
0
2
59
1.10

Tables:   1

The End!