Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005613.1 Hibiscus syriacus cultivar Beakdansim tig00013051_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72894

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5351--5394
16
2.6
17
85
10
63
63
22
0
13
1.29
5354--5395
17
2.6
16
79
20
52
61
21
0
16
1.34
6780--6812
12
2.6
13
90
4
50
45
6
12
36
1.66
16808--16837
2
15.5
2
93
6
53
53
0
0
46
1.00
16842--16978
39
3.7
36
88
5
193
43
5
7
43
1.56
16960--17026
2
33.5
2
96
0
125
52
0
0
47
1.00
19546--19578
16
2.1
16
88
11
50
24
0
3
72
0.98
32683--32839
78
2.0
77
91
6
253
47
5
3
42
1.45
32773--32896
64
2.0
63
90
4
196
45
6
4
43
1.51
33299--33368
32
2.2
32
87
5
97
40
2
30
27
1.71
35060--35094
15
2.4
15
95
4
63
42
0
14
42
1.45
49124--49167
21
2.1
21
100
0
88
38
9
9
43
1.68
53259--53303
3
15.3
3
95
4
83
64
0
0
35
0.94
53625--53880
116
2.2
116
84
6
338
24
22
14
38
1.92
65463--65501
21
1.9
21
89
5
62
28
17
17
35
1.94

Tables:   1

The End!