Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005614.1 Hibiscus syriacus cultivar Beakdansim tig00013059_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49316

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5888--5947
22
2.8
22
92
2
95
31
25
16
26
1.96
8907--9022
39
3.0
38
88
5
169
42
20
14
22
1.89
9480--9514
16
2.2
16
90
5
54
22
28
25
22
1.99
17260--17300
21
2.0
20
85
4
55
26
0
29
43
1.55
17417--17449
17
1.9
17
93
0
57
27
3
18
51
1.60
24030--24060
2
15.5
2
100
0
62
51
0
0
48
1.00
30533--30616
2
43.0
2
90
4
136
50
2
0
47
1.14
30643--30731
9
8.6
10
72
18
51
16
5
2
75
1.10
30643--30720
9
8.7
9
71
16
56
17
5
1
75
1.05
30643--30731
5
17.2
5
70
21
51
16
5
2
75
1.10
30646--30720
13
5.6
13
76
13
64
17
5
1
76
1.05
43303--43338
8
4.4
8
89
6
54
0
2
22
75
0.94
43309--43339
9
3.6
9
95
4
55
0
0
19
80
0.71

Tables:   1

The End!