Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005622.1 Hibiscus syriacus cultivar Beakdansim tig00013084_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40427

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1737--1888
57
2.6
59
86
4
182
30
16
21
31
1.95
1850--1920
34
2.2
32
92
5
115
36
15
16
30
1.90
2744--2777
18
1.9
18
94
5
61
35
5
0
58
1.22
2744--2790
18
2.5
18
83
13
51
36
8
0
55
1.31
4856--4893
12
3.2
12
86
13
53
28
7
0
63
1.23
4878--4931
30
1.9
28
85
14
76
40
3
5
50
1.44
5140--5999
6
143.7
6
83
6
771
51
1
46
0
1.12
5138--6006
15
60.4
14
71
15
261
52
1
46
0
1.12
7182--7212
14
2.2
14
100
0
62
61
6
6
25
1.45
11840--11884
2
22.5
2
100
0
90
51
0
0
48
1.00
17780--17821
21
2.0
21
86
9
59
30
14
9
45
1.77
28350--28609
45
5.8
45
90
0
396
34
11
25
28
1.91
35794--35833
21
1.9
21
84
0
53
30
0
32
37
1.58

Tables:   1

The End!