Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005623.1 Hibiscus syriacus cultivar Beakdansim tig00013093_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56425

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8228--8290
14
4.5
14
88
11
94
85
1
11
1
0.73
8225--8285
9
6.9
9
76
10
63
85
1
11
1
0.75
8251--8290
6
7.2
6
88
5
50
87
0
12
0
0.54
8228--8290
27
2.2
29
91
5
103
85
1
11
1
0.73
8337--8412
24
3.2
23
94
5
134
39
11
27
21
1.88
9279--9855
136
4.2
135
85
2
717
33
15
22
28
1.94
9741--9921
96
1.9
96
81
2
220
28
21
18
31
1.97
10112--10164
24
2.3
22
78
18
54
47
39
3
9
1.54
11618--11653
10
3.6
10
84
0
54
2
0
8
88
0.59
11615--11653
20
2.0
20
100
0
78
5
0
7
87
0.68
19841--19884
21
2.0
22
82
4
54
34
11
20
34
1.88
20426--20494
18
3.9
18
88
1
95
43
4
15
36
1.67
20426--20545
35
3.4
35
75
10
111
43
7
15
34
1.74
20464--20515
18
2.9
18
86
11
63
44
7
7
40
1.62
21851--21888
17
2.2
17
100
0
76
18
47
23
10
1.79
21896--21963
29
2.3
29
87
2
100
36
5
16
41
1.72
22838--23004
42
4.0
41
94
3
280
18
25
25
31
1.98
29170--29225
29
1.9
29
92
0
94
39
1
14
44
1.55
29170--29238
29
2.3
29
87
2
93
36
2
17
43
1.64
30124--30290
42
4.0
41
91
3
262
17
25
24
32
1.97
33861--34143
122
2.3
121
85
3
372
26
12
25
35
1.91
35302--35370
6
12.2
6
69
22
51
4
14
1
79
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35304--35372
22
3.2
21
87
6
95
4
15
1
78
0.98
35310--35346
15
2.4
16
91
8
60
5
13
0
81
0.86
41762--41914
77
2.0
79
85
7
215
42
3
10
43
1.57
49918--49954
10
3.7
10
85
0
56
86
8
5
0
0.70
52506--52552
22
2.0
24
84
8
62
51
14
4
29
1.62

Tables:   1

The End!