Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005626.1 Hibiscus syriacus cultivar Beakdansim tig00013101_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71111

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1623--1673
21
2.4
21
93
0
84
37
9
19
33
1.85
2132--2431
161
1.9
156
88
4
458
50
5
17
27
1.68
5613--5679
28
2.3
28
84
7
80
25
23
13
37
1.92
5632--5687
28
2.0
28
96
0
103
19
25
16
39
1.91
5643--5699
28
2.1
28
83
3
71
19
24
19
36
1.94
6645--6673
2
14.5
2
100
0
58
48
0
0
51
1.00
8834--9081
138
1.8
137
85
4
356
39
17
14
27
1.89
10853--11011
74
2.1
74
88
2
230
22
20
27
30
1.98
12589--12616
12
2.3
12
100
0
56
7
7
46
39
1.59
13259--13356
21
4.7
20
78
13
74
29
16
29
24
1.96
19115--19304
74
2.6
74
88
4
267
22
19
28
29
1.98
19458--19500
17
2.5
17
100
0
86
48
4
4
41
1.44
19606--19642
8
4.6
8
100
0
74
10
35
0
54
1.36
21929--21965
16
2.3
17
86
9
51
35
5
0
59
1.20
30454--30659
35
5.8
33
69
21
98
45
3
5
45
1.44
30454--30669
72
3.0
68
76
18
208
45
3
5
45
1.43
35410--35442
17
2.1
17
88
11
52
48
12
21
18
1.80
42362--42422
5
12.0
5
74
10
52
29
0
0
70
0.88
42352--42426
26
3.1
26
76
21
90
26
1
0
72
0.93
42350--42426
5
14.6
5
70
20
50
27
1
0
71
0.94
42367--42443
21
3.7
21
89
8
113
29
1
0
68
0.97
42603--42633
6
5.2
6
100
0
62
16
83
0
0
0.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47081--47130
23
2.2
22
86
10
66
40
20
22
18
1.92
47175--47250
21
3.6
21
71
7
55
34
22
18
25
1.96
50544--50813
55
4.9
54
86
4
364
27
18
19
35
1.95
50544--50883
55
6.2
55
81
9
299
28
18
19
33
1.95
54986--55010
13
1.9
13
100
0
50
44
0
0
56
0.99
55865--55935
4
17.8
4
100
0
142
23
0
25
50
1.49
59390--59486
30
3.2
30
84
5
126
49
6
18
25
1.71
61410--61455
7
6.4
7
95
5
83
82
0
17
0
0.67
61598--61639
18
2.3
18
100
0
84
54
0
26
19
1.44
64074--64737
73
9.1
73
91
0
1010
32
17
13
36
1.89
64079--64737
291
2.3
290
91
1
1052
32
16
13
36
1.89
64715--64758
21
2.1
21
100
0
88
34
9
15
40
1.79
64645--64835
94
2.0
94
82
4
233
31
16
15
37
1.89
65251--65564
139
2.3
137
85
5
409
36
17
20
25
1.94
66940--67019
33
2.4
33
91
4
124
23
8
3
63
1.39
66988--67066
26
3.2
25
77
13
74
24
8
2
64
1.35
66988--67072
25
3.3
26
77
12
79
24
8
2
64
1.33
68774--68831
11
5.1
11
71
8
53
55
8
1
34
1.41

Tables:   1

The End!