Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005627.1 Hibiscus syriacus cultivar Beakdansim tig00013110_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70913

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3230--3264
18
1.9
18
94
0
61
34
2
11
51
1.53
3351--4559
197
6.1
199
96
1
2149
37
15
14
32
1.88
6008--6075
21
3.4
18
69
21
55
36
8
35
19
1.83
6008--6099
6
15.3
6
79
0
67
36
7
34
20
1.81
6023--6103
3
27.0
3
75
0
72
35
6
34
23
1.80
6008--6099
42
2.2
42
90
0
148
36
7
34
20
1.81
6008--6103
12
8.0
12
82
0
84
36
7
34
21
1.82
6011--6103
18
5.2
18
77
0
78
35
7
34
22
1.83
7470--8324
184
4.7
184
98
0
1640
35
14
15
34
1.89
10880--10944
23
2.8
23
90
0
94
35
7
18
38
1.80
11148--11184
18
2.1
18
89
0
56
32
5
10
51
1.60
11140--11186
24
2.0
24
86
0
67
34
4
14
46
1.64
12815--12888
29
2.7
29
83
10
84
32
8
1
58
1.36
12839--12888
26
1.9
25
88
8
73
28
10
0
62
1.27
13002--13055
25
2.3
22
78
12
54
24
3
3
68
1.22
15160--15185
13
2.0
13
100
0
52
30
0
7
61
1.24
15184--15208
9
2.8
9
100
0
50
24
0
0
76
0.80
19374--19430
21
2.5
23
83
11
73
35
21
17
26
1.95
21077--21134
25
2.3
26
80
14
68
56
1
0
41
1.09
24234--24709
138
3.4
138
91
0
763
23
21
21
34
1.97
24754--24816
23
2.7
23
90
0
99
50
0
17
31
1.46
24904--24934
14
2.2
14
100
0
62
25
0
16
58
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25588--25660
21
3.5
21
81
7
94
26
21
32
19
1.97
32427--32465
14
2.9
13
81
7
51
61
2
0
35
1.10
33006--33044
18
2.4
16
87
12
53
51
7
0
41
1.31
33005--33063
30
2.0
30
83
12
77
49
6
0
44
1.29
34982--35010
12
2.3
13
94
5
51
24
24
10
41
1.86
49206--49267
30
2.1
29
85
11
83
48
4
6
40
1.50
54643--54711
29
2.3
30
72
2
77
53
4
11
30
1.56
57635--57703
29
2.4
29
90
0
111
43
2
18
34
1.65
64657--64734
22
3.5
22
87
3
111
21
35
24
17
1.95
66921--66948
13
2.2
13
100
0
56
50
28
0
21
1.49
69195--69257
20
2.9
21
79
9
65
15
25
34
23
1.95

Tables:   1

The End!