Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01005632.1 Hibiscus syriacus cultivar Beakdansim tig00013131_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 66437
ACGTcount: A:0.31, C:0.18, G:0.19, T:0.32
Found at i:8616 original size:9 final size:9
Alignment explanation
Indices: 8590--8627 Score: 51
Period size: 9 Copynumber: 4.2 Consensus size: 9
8580 CCAGCACTCA
8590 AAAAGAAA-
1 AAAAGAAAG
8598 AAAAGCAAAG
1 AAAAG-AAAG
*
8608 AAAATAAAG
1 AAAAGAAAG
8617 AAAAGAAAG
1 AAAAGAAAG
8626 AA
1 AA
8628 GTTGAAGAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 3
0.84 0.06 0.10
Matches are distributed among these distances:
8 5 0.19
9 17 0.65
10 4 0.15
ACGTcount: A:0.79, C:0.03, G:0.16, T:0.03
Consensus pattern (9 bp):
AAAAGAAAG
Found at i:8621 original size:14 final size:13
Alignment explanation
Indices: 8590--8624 Score: 52
Period size: 14 Copynumber: 2.6 Consensus size: 13
8580 CCAGCACTCA
8590 AAAAGAAAAAAAG
1 AAAAGAAAAAAAG
*
8603 CAAAGAAAATAAAG
1 AAAAGAAAA-AAAG
8617 AAAAGAAA
1 AAAAGAAA
8625 GAAGTTGAAG
Statistics
Matches: 19, Mismatches: 2, Indels: 1
0.86 0.09 0.05
Matches are distributed among these distances:
13 8 0.42
14 11 0.58
ACGTcount: A:0.80, C:0.03, G:0.14, T:0.03
Consensus pattern (13 bp):
AAAAGAAAAAAAG
Found at i:15579 original size:24 final size:21
Alignment explanation
Indices: 15544--15586 Score: 50
Period size: 23 Copynumber: 1.9 Consensus size: 21
15534 AGCTCATTCT
*
15544 TTTGAATTTCAAGAGGTACATCC
1 TTTGAATGTCAA-AGG-ACATCC
15567 TTTGAAATGTCAAAGGACAT
1 TTTG-AATGTCAAAGGACAT
15587 ATCTTGTGCA
Statistics
Matches: 18, Mismatches: 1, Indels: 3
0.82 0.05 0.14
Matches are distributed among these distances:
22 4 0.22
23 7 0.39
24 7 0.39
ACGTcount: A:0.35, C:0.14, G:0.19, T:0.33
Consensus pattern (21 bp):
TTTGAATGTCAAAGGACATCC
Found at i:19377 original size:90 final size:91
Alignment explanation
Indices: 19261--19433 Score: 267
Period size: 90 Copynumber: 1.9 Consensus size: 91
19251 GGGAAATGAT
* *
19261 GCTTGGCCGAATAGGGAGAGAGCTCTTCATCTTGGTGCCTAAATAAACCACATACAAGGCACAT-
1 GCTTGGCCGAATAGGGAGAGAACTCTTCATCTTGGCGCCTAAATAAACCACATACAAGGCACATG
*
19325 GGGGCTGTTCACATGCAAAATATATG
66 GGGGCTGGTCACATGCAAAATATATG
* * * *
19351 GCTTGGCCGAATAGGGAGAGAACTCTTCATCTTGGCGCCTAAATGATCCTCATGCAAGGCACATG
1 GCTTGGCCGAATAGGGAGAGAACTCTTCATCTTGGCGCCTAAATAAACCACATACAAGGCACATG
*
19416 GGGGCTGGTCATATGCAA
66 GGGGCTGGTCACATGCAA
19434 GGCACATGGG
Statistics
Matches: 74, Mismatches: 8, Indels: 1
0.89 0.10 0.01
Matches are distributed among these distances:
90 58 0.78
91 16 0.22
ACGTcount: A:0.28, C:0.22, G:0.27, T:0.23
Consensus pattern (91 bp):
GCTTGGCCGAATAGGGAGAGAACTCTTCATCTTGGCGCCTAAATAAACCACATACAAGGCACATG
GGGGCTGGTCACATGCAAAATATATG
Found at i:20990 original size:24 final size:24
Alignment explanation
Indices: 20955--21033 Score: 72
Period size: 24 Copynumber: 3.3 Consensus size: 24
20945 ACTTGGAGCC
*
20955 TCAA-TGATCACAACTTGTGGCACT
1 TCAAGTGA-CACAACTTGTGGAACT
* * *
20979 TCAAGTGACACATCTTTTTGAACT
1 TCAAGTGACACAACTTGTGGAACT
* *
21003 TCAAGTGGCATAA-TTGTTGGAACT
1 TCAAGTGACACAACTTG-TGGAACT
21027 TCAAGTG
1 TCAAGTG
21034 GCATAATTGT
Statistics
Matches: 44, Mismatches: 9, Indels: 4
0.77 0.16 0.07
Matches are distributed among these distances:
23 2 0.05
24 39 0.89
25 3 0.07
ACGTcount: A:0.29, C:0.19, G:0.19, T:0.33
Consensus pattern (24 bp):
TCAAGTGACACAACTTGTGGAACT
Found at i:21034 original size:24 final size:24
Alignment explanation
Indices: 20998--21054 Score: 105
Period size: 24 Copynumber: 2.4 Consensus size: 24
20988 ACATCTTTTT
20998 GAACTTCAAGTGGCATAATTGTTG
1 GAACTTCAAGTGGCATAATTGTTG
21022 GAACTTCAAGTGGCATAATTGTTG
1 GAACTTCAAGTGGCATAATTGTTG
*
21046 GAACGTCAA
1 GAACTTCAA
21055 AGGACATGTC
Statistics
Matches: 32, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
24 32 1.00
ACGTcount: A:0.32, C:0.14, G:0.25, T:0.30
Consensus pattern (24 bp):
GAACTTCAAGTGGCATAATTGTTG
Found at i:23294 original size:90 final size:91
Alignment explanation
Indices: 23138--23319 Score: 240
Period size: 90 Copynumber: 2.0 Consensus size: 91
23128 GGGAAATGAT
* *
23138 GCTTGGCCGAATAGGGAGAGAGCTCTTCATCTTGGCACCTAAATAAACCACATGCAAGGAACAT-
1 GCTTGGCCGAATAGGGAGAAAACTCTTCATCTTGGCACCTAAATAAACCACATGCAAGGAACATG
*
23202 GGGGCTGTTCACATGCAAAACACATG
66 GGGGCTGGTCACATGCAAAACACATG
* * * * * * *
23228 GCTTGGCTGAATAGGGAGAAAACTCTTCATCTTGGCGCCTAAATGATCCTCATGCAAGGCATATG
1 GCTTGGCCGAATAGGGAGAAAACTCTTCATCTTGGCACCTAAATAAACCACATGCAAGGAACATG
* **
23293 GGGGCTGGTCATATGCAAGGCACATG
66 GGGGCTGGTCACATGCAAAACACATG
23319 G
1 G
23320 GTGTTCTAGG
Statistics
Matches: 78, Mismatches: 13, Indels: 1
0.85 0.14 0.01
Matches are distributed among these distances:
90 55 0.71
91 23 0.29
ACGTcount: A:0.29, C:0.22, G:0.27, T:0.22
Consensus pattern (91 bp):
GCTTGGCCGAATAGGGAGAAAACTCTTCATCTTGGCACCTAAATAAACCACATGCAAGGAACATG
GGGGCTGGTCACATGCAAAACACATG
Found at i:24552 original size:269 final size:269
Alignment explanation
Indices: 24070--24608 Score: 970
Period size: 269 Copynumber: 2.0 Consensus size: 269
24060 ATGATAAATG
*
24070 GAAACATGTAATAATAATATCCTAAGAAATGATATGTAATTATAGCATATATTTGAATAATATGA
1 GAAACATGTAATAATAATATCCTAAGAAATGATATGTAATCATAGCATATATTTGAATAATATGA
*
24135 AAAACATGATCAAATAAGCATAGGATGGAAATAATAATATGATAATTTATACTAACATATGAATA
66 AAAACATGATCAAATAAGCATAGGATGAAAATAATAATATGATAATTTATACTAACATATGAATA
*
24200 CATGCTTTTGATAGAATAGAATGTATAAATGATATAGTATAAGATAGGGTAATGAAGAACTCCCT
131 CATGCTTATGATAGAATAGAATGTATAAATGATATAGTATAAGATAGGGTAATGAAGAACTCCCT
*
24265 TAGAAACAACTTTGAAGAACATCCATGGTGTGTTCAAGTCATGGAGAAAGTTGGAGCTAGTTTGG
196 TAGAAACAACTATGAAGAACATCCATGGTGTGTTCAAGTCATGGAGAAAGTTGGAGCTAGTTTGG
*
24330 ATCGTATCA
261 ATAGTATCA
*
24339 GAAACATGTAATAATAATGTCCTAAGAAATGATATGTAATCATAGCATATATTTGAATAATATGA
1 GAAACATGTAATAATAATATCCTAAGAAATGATATGTAATCATAGCATATATTTGAATAATATGA
* *
24404 AAAACATGATCAAATAAGCATAGGATGAAAATAATAATATGATAATTTATACTAACATGTGAATG
66 AAAACATGATCAAATAAGCATAGGATGAAAATAATAATATGATAATTTATACTAACATATGAATA
* *
24469 CATGCTTATGATAGAATATATTGTATAAATGATATAGTATAAGATAGGGTAATGAAGAACTCCCT
131 CATGCTTATGATAGAATAGAATGTATAAATGATATAGTATAAGATAGGGTAATGAAGAACTCCCT
* *
24534 TAGAAACAGCTATGAAGAACATCCATGGTGTGTTCAAGTCATGGAGAAAGTTGGAGCTTGTTTGG
196 TAGAAACAACTATGAAGAACATCCATGGTGTGTTCAAGTCATGGAGAAAGTTGGAGCTAGTTTGG
24599 ATAGTATCA
261 ATAGTATCA
24608 G
1 G
24609 TGATGTTGAA
Statistics
Matches: 258, Mismatches: 12, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
269 258 1.00
ACGTcount: A:0.42, C:0.09, G:0.18, T:0.30
Consensus pattern (269 bp):
GAAACATGTAATAATAATATCCTAAGAAATGATATGTAATCATAGCATATATTTGAATAATATGA
AAAACATGATCAAATAAGCATAGGATGAAAATAATAATATGATAATTTATACTAACATATGAATA
CATGCTTATGATAGAATAGAATGTATAAATGATATAGTATAAGATAGGGTAATGAAGAACTCCCT
TAGAAACAACTATGAAGAACATCCATGGTGTGTTCAAGTCATGGAGAAAGTTGGAGCTAGTTTGG
ATAGTATCA
Found at i:30555 original size:13 final size:14
Alignment explanation
Indices: 30525--30553 Score: 51
Period size: 14 Copynumber: 2.1 Consensus size: 14
30515 ATTAAACACC
30525 TTTC-ACATACCTT
1 TTTCAACATACCTT
30538 TTTCAACATACCTT
1 TTTCAACATACCTT
30552 TT
1 TT
30554 CATCTTTGGC
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
13 4 0.27
14 11 0.73
ACGTcount: A:0.24, C:0.28, G:0.00, T:0.48
Consensus pattern (14 bp):
TTTCAACATACCTT
Found at i:32283 original size:33 final size:32
Alignment explanation
Indices: 32219--32283 Score: 78
Period size: 33 Copynumber: 2.0 Consensus size: 32
32209 CTTGTTGATG
*
32219 AATGAAGGATGATTTAATGGTGATGAAATGGT
1 AATGAAGGATGATTTAATGGCGATGAAATGGT
* *
32251 AATGAAAGGATGATGTTATTGGCG-TGATATGGT
1 AATG-AAGGATGAT-TTAATGGCGATGAAATGGT
32284 GATGGATTAT
Statistics
Matches: 28, Mismatches: 3, Indels: 3
0.82 0.09 0.09
Matches are distributed among these distances:
32 4 0.14
33 17 0.61
34 7 0.25
ACGTcount: A:0.34, C:0.02, G:0.32, T:0.32
Consensus pattern (32 bp):
AATGAAGGATGATTTAATGGCGATGAAATGGT
Found at i:36341 original size:17 final size:16
Alignment explanation
Indices: 36319--36353 Score: 52
Period size: 17 Copynumber: 2.1 Consensus size: 16
36309 TGTAGGAGTC
36319 TTTTCTTTTCTCTTTTG
1 TTTTCTTTT-TCTTTTG
*
36336 TTTTCTTTTTTTTTTG
1 TTTTCTTTTTCTTTTG
36352 TT
1 TT
36354 GCTTTTGTTG
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
16 8 0.47
17 9 0.53
ACGTcount: A:0.00, C:0.11, G:0.06, T:0.83
Consensus pattern (16 bp):
TTTTCTTTTTCTTTTG
Found at i:36762 original size:33 final size:32
Alignment explanation
Indices: 36698--36762 Score: 78
Period size: 33 Copynumber: 2.0 Consensus size: 32
36688 CTTGTTGATG
*
36698 AATGAAGGATGATTTAATGGTGATGAAATGGT
1 AATGAAGGATGATTTAATGGCGATGAAATGGT
* *
36730 AATGAAAGGATGATGTTATTGGCG-TGATATGGT
1 AATG-AAGGATGAT-TTAATGGCGATGAAATGGT
36763 GATGGATTAT
Statistics
Matches: 28, Mismatches: 3, Indels: 3
0.82 0.09 0.09
Matches are distributed among these distances:
32 4 0.14
33 17 0.61
34 7 0.25
ACGTcount: A:0.34, C:0.02, G:0.32, T:0.32
Consensus pattern (32 bp):
AATGAAGGATGATTTAATGGCGATGAAATGGT
Found at i:42462 original size:25 final size:25
Alignment explanation
Indices: 42428--42478 Score: 102
Period size: 25 Copynumber: 2.0 Consensus size: 25
42418 GTTCATCAAG
42428 AAGTTACATGAACAAATTTGACACA
1 AAGTTACATGAACAAATTTGACACA
42453 AAGTTACATGAACAAATTTGACACA
1 AAGTTACATGAACAAATTTGACACA
42478 A
1 A
42479 CATTGAGAGA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
25 26 1.00
ACGTcount: A:0.49, C:0.16, G:0.12, T:0.24
Consensus pattern (25 bp):
AAGTTACATGAACAAATTTGACACA
Found at i:50596 original size:15 final size:16
Alignment explanation
Indices: 50564--50605 Score: 59
Period size: 15 Copynumber: 2.6 Consensus size: 16
50554 AAATGATTAA
50564 GAAAGGAAATGAAAATG
1 GAAA-GAAATGAAAATG
50581 GAAAGAAATG-AAATG
1 GAAAGAAATGAAAATG
*
50596 GATAGAAATG
1 GAAAGAAATG
50606 TTATCAAAGA
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
15 14 0.58
16 6 0.25
17 4 0.17
ACGTcount: A:0.57, C:0.00, G:0.29, T:0.14
Consensus pattern (16 bp):
GAAAGAAATGAAAATG
Found at i:57248 original size:36 final size:36
Alignment explanation
Indices: 57201--57301 Score: 150
Period size: 36 Copynumber: 2.8 Consensus size: 36
57191 ATACAATCTT
*
57201 TCCATCACCATTATCACGCCTATATCATCACGATAG
1 TCCATCACCATTATCACGCCTATATCATCACCATAG
*
57237 TCCATCACCATTATCACGCCTATATCATCACCATAT
1 TCCATCACCATTATCACGCCTATATCATCACCATAG
* * *
57273 TCCATTACCA-TATCACGCCAATAACATCA
1 TCCATCACCATTATCACGCCTATATCATCA
57302 TCCTTCCATT
Statistics
Matches: 60, Mismatches: 5, Indels: 1
0.91 0.08 0.02
Matches are distributed among these distances:
35 17 0.28
36 43 0.72
ACGTcount: A:0.33, C:0.35, G:0.05, T:0.28
Consensus pattern (36 bp):
TCCATCACCATTATCACGCCTATATCATCACCATAG
Found at i:57314 original size:33 final size:33
Alignment explanation
Indices: 57237--57340 Score: 95
Period size: 33 Copynumber: 3.1 Consensus size: 33
57227 ATCACGATAG
* * *
57237 TCCATCACCATTATCACGCCTATATCATCA-CCATAT
1 TCCATTACCA-TATCACGCCAATAACATCATCC---T
57273 TCCATTACCATATCACGCCAATAACATCATCCT
1 TCCATTACCATATCACGCCAATAACATCATCCT
* * *
57306 TCCATTACCATTTCATCACCATTAA-ATCATCCT
1 TCCATTACCATATCA-CGCCAATAACATCATCCT
57339 TC
1 TC
57341 ATTCATCAAC
Statistics
Matches: 60, Mismatches: 6, Indels: 7
0.82 0.08 0.10
Matches are distributed among these distances:
33 25 0.42
34 7 0.12
35 17 0.28
36 11 0.18
ACGTcount: A:0.31, C:0.36, G:0.02, T:0.32
Consensus pattern (33 bp):
TCCATTACCATATCACGCCAATAACATCATCCT
Found at i:57719 original size:24 final size:24
Alignment explanation
Indices: 57679--57725 Score: 62
Period size: 25 Copynumber: 2.0 Consensus size: 24
57669 AAAGTGCTAC
57679 AACAAAAAGCAACAAGAAAGAAGAA
1 AACAAAAAGCAACAAGAAA-AAGAA
57704 AACAAAAGAG-AA-AAGAAAAAGA
1 AACAAAA-AGCAACAAGAAAAAGA
57726 CTCCTACAAT
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
23 4 0.19
24 6 0.29
25 9 0.43
26 2 0.10
ACGTcount: A:0.74, C:0.09, G:0.17, T:0.00
Consensus pattern (24 bp):
AACAAAAAGCAACAAGAAAAAGAA
Found at i:57971 original size:23 final size:24
Alignment explanation
Indices: 57940--57988 Score: 57
Period size: 23 Copynumber: 2.1 Consensus size: 24
57930 TTTCTTACTA
*
57940 TTTCATTTC-TTATTCTT-TCATCT
1 TTTCATTTCATTA-CCTTATCATCT
*
57963 TTTCTTTTCATTACCTTATCATCT
1 TTTCATTTCATTACCTTATCATCT
57987 TT
1 TT
57989 CTTAATCTTT
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
23 11 0.50
24 11 0.50
ACGTcount: A:0.14, C:0.22, G:0.00, T:0.63
Consensus pattern (24 bp):
TTTCATTTCATTACCTTATCATCT
Found at i:61733 original size:13 final size:11
Alignment explanation
Indices: 61695--61778 Score: 66
Period size: 13 Copynumber: 7.2 Consensus size: 11
61685 ACAATCTGTC
61695 CATCACCAT-T
1 CATCACCATAT
61705 -ATCACGCTATAT
1 CATCAC-C-ATAT
61717 CATCACCATAGT
1 CATCACCATA-T
61729 CCATCACCATTAT
1 -CATCACCA-TAT
*
61742 CA-CGCCTATAT
1 CATCACC-ATAT
61753 CATCACCATATT
1 CATCACCATA-T
61765 CCATCACCATAT
1 -CATCACCATAT
61777 CA
1 CA
61779 CGCCAATAAC
Statistics
Matches: 61, Mismatches: 2, Indels: 21
0.73 0.02 0.25
Matches are distributed among these distances:
9 5 0.08
10 1 0.02
11 18 0.30
12 11 0.18
13 24 0.39
14 2 0.03
ACGTcount: A:0.32, C:0.36, G:0.04, T:0.29
Consensus pattern (11 bp):
CATCACCATAT
Found at i:61792 original size:35 final size:36
Alignment explanation
Indices: 61692--61792 Score: 161
Period size: 35 Copynumber: 2.9 Consensus size: 36
61682 GATACAATCT
61692 GTCCATCACCATTATCACG-CTATATCATCACCATA
1 GTCCATCACCATTATCACGCCTATATCATCACCATA
61727 GTCCATCACCATTATCACGCCTATATCATCACCATA
1 GTCCATCACCATTATCACGCCTATATCATCACCATA
* * *
61763 TTCCATCACCA-TATCACGCCAATAACATCA
1 GTCCATCACCATTATCACGCCTATATCATCA
61793 TCCTTCCATT
Statistics
Matches: 62, Mismatches: 3, Indels: 2
0.93 0.04 0.03
Matches are distributed among these distances:
35 36 0.58
36 26 0.42
ACGTcount: A:0.33, C:0.36, G:0.05, T:0.27
Consensus pattern (36 bp):
GTCCATCACCATTATCACGCCTATATCATCACCATA
Found at i:61807 original size:33 final size:33
Alignment explanation
Indices: 61693--61831 Score: 97
Period size: 35 Copynumber: 4.1 Consensus size: 33
61683 ATACAATCTG
* *
61693 TCCATCACCATTATCACG-CTATATCATCA-CCAT
1 TCCATCACCA-TATCACGCCAATAACATCATCC-T
* *
61726 AGTCCATCACCATTATCACGCCTATATCATCA-CCATAT
1 --TCCATCACCA-TATCACGCCAATAACATCATCC---T
61764 TCCATCACCATATCACGCCAATAACATCATCCT
1 TCCATCACCATATCACGCCAATAACATCATCCT
* * * *
61797 TCCATTACCATTTCATCACCATTAA-ATCATCCT
1 TCCATCACCATATCA-CGCCAATAACATCATCCT
61830 TC
1 TC
61832 ATTCATCAAC
Statistics
Matches: 93, Mismatches: 6, Indels: 12
0.84 0.05 0.11
Matches are distributed among these distances:
33 24 0.26
34 7 0.08
35 35 0.38
36 25 0.27
38 2 0.02
ACGTcount: A:0.31, C:0.36, G:0.03, T:0.30
Consensus pattern (33 bp):
TCCATCACCATATCACGCCAATAACATCATCCT
Found at i:63077 original size:27 final size:27
Alignment explanation
Indices: 63046--63105 Score: 120
Period size: 27 Copynumber: 2.2 Consensus size: 27
63036 AGGTAGGAAA
63046 GCAAAAAAAGAAAAAGCTAAGAAAGAG
1 GCAAAAAAAGAAAAAGCTAAGAAAGAG
63073 GCAAAAAAAGAAAAAGCTAAGAAAGAG
1 GCAAAAAAAGAAAAAGCTAAGAAAGAG
63100 GCAAAA
1 GCAAAA
63106 GAAAAAGATG
Statistics
Matches: 33, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
27 33 1.00
ACGTcount: A:0.67, C:0.08, G:0.22, T:0.03
Consensus pattern (27 bp):
GCAAAAAAAGAAAAAGCTAAGAAAGAG
Found at i:63078 original size:24 final size:25
Alignment explanation
Indices: 63050--63112 Score: 101
Period size: 27 Copynumber: 2.5 Consensus size: 25
63040 AGGAAAGCAA
63050 AAAAAGAAAAAGCTAAGAAAGAGGC
1 AAAAAGAAAAAGCTAAGAAAGAGGC
63075 AAAAAAAGAAAAAGCTAAGAAAGAGGC
1 --AAAAAGAAAAAGCTAAGAAAGAGGC
63102 -AAAAGAAAAAG
1 AAAAAGAAAAAG
63113 ATGTCACTAG
Statistics
Matches: 36, Mismatches: 0, Indels: 3
0.92 0.00 0.08
Matches are distributed among these distances:
24 11 0.31
27 25 0.69
ACGTcount: A:0.68, C:0.06, G:0.22, T:0.03
Consensus pattern (25 bp):
AAAAAGAAAAAGCTAAGAAAGAGGC
Done.