Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005635.1 Hibiscus syriacus cultivar Beakdansim tig00013138_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63624

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3946--4044
52
1.9
52
89
0
153
34
8
2
55
1.41
5816--5843
2
14.0
2
100
0
56
50
0
0
50
1.00
6494--6539
7
6.4
7
97
2
83
15
26
0
58
1.37
14890--14925
17
2.1
17
89
0
54
52
13
0
33
1.41
14947--15005
28
2.1
27
90
3
91
11
37
3
47
1.57
16472--17059
55
10.8
55
83
5
520
30
23
17
28
1.97
16547--16645
49
2.0
49
92
0
162
32
19
18
30
1.95
17070--17141
37
1.9
38
94
2
128
19
22
19
38
1.93
18428--18523
6
15.0
6
69
18
52
9
14
0
76
1.03
18422--18554
23
6.0
21
71
14
63
11
12
0
75
1.04
18438--18589
8
18.8
8
76
18
113
12
13
0
74
1.08
18526--18587
25
2.5
25
81
5
72
14
9
0
75
1.03
18428--18562
71
1.9
70
83
10
177
11
12
0
75
1.05
29578--29613
17
2.1
17
89
0
54
52
13
0
33
1.41
33198--33237
21
1.9
21
84
0
53
42
15
20
22
1.88
41363--41404
2
21.0
2
100
0
84
50
0
0
50
1.00
45521--45561
20
2.0
20
100
0
82
29
21
9
39
1.86
47717--47792
17
4.7
15
77
16
71
56
2
2
38
1.27
49301--49351
16
2.9
18
68
11
52
23
21
13
41
1.89
52179--52416
123
2.0
120
88
2
359
26
17
15
40
1.90
52437--52912
73
6.5
73
87
4
633
40
11
17
30
1.85
52437--52918
218
2.2
219
88
2
720
40
11
17
30
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52994--53110
42
2.8
42
87
5
164
35
21
19
23
1.96
56117--56149
2
16.5
2
100
0
66
48
0
0
51
1.00
56474--56520
18
2.6
18
100
0
94
25
31
14
27
1.95
56825--56880
22
2.5
23
80
13
71
35
21
1
41
1.64
56827--56857
14
2.1
15
94
5
55
35
19
0
45
1.51
58306--58344
18
2.2
18
100
0
78
28
30
0
41
1.57
61285--61351
18
3.7
18
85
0
89
28
31
19
20
1.97
61648--61697
22
2.2
23
89
3
75
36
18
2
44
1.61

Tables:   1

The End!