Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005638.1 Hibiscus syriacus cultivar Beakdansim tig00013143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42131

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7616--7681
1
66.0
1
76
0
51
1
3
9
86
0.74
7619--7685
9
7.3
9
80
9
82
1
2
10
85
0.78
7618--7686
19
3.5
19
86
4
93
1
2
11
84
0.81
7618--7686
29
2.3
30
90
9
115
1
2
11
84
0.81
14469--14506
19
2.0
20
89
5
60
71
0
10
18
1.14
14478--14511
13
2.5
14
90
4
52
73
0
11
14
1.10
14921--14972
19
2.6
20
82
14
63
44
5
13
36
1.68
18125--18180
18
3.2
18
79
2
69
0
16
1
82
0.76
18131--18182
18
2.9
18
83
13
72
0
15
3
80
0.85
18888--18939
19
2.6
21
90
6
81
46
5
13
34
1.67
19245--19277
16
2.1
16
94
0
57
30
18
9
42
1.81
21012--21115
33
3.1
33
82
9
95
30
36
1
30
1.69
25421--25524
33
3.1
33
82
9
95
30
36
1
30
1.69
28620--28652
16
2.1
16
100
0
66
33
18
6
42
1.75
30744--30803
13
4.8
13
75
10
54
3
16
3
76
1.05
35460--35532
24
2.8
28
75
25
95
10
19
13
56
1.67
39399--39454
24
2.4
24
82
11
64
7
14
12
66
1.44
41717--41772
2
29.5
2
85
10
82
55
0
0
44
0.99
41717--41772
21
2.8
21
89
5
89
55
0
0
44
0.99
41712--41784
23
3.3
23
84
7
71
56
1
2
39
1.22

Tables:   1

The End!