Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005640.1 Hibiscus syriacus cultivar Beakdansim tig00013145_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72690

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9074--9115
22
2.0
21
90
4
66
40
33
2
23
1.68
16140--16168
15
2.0
15
93
6
51
0
20
3
75
0.94
18096--18225
54
2.4
54
85
0
179
26
16
21
35
1.95
27851--27882
13
2.4
14
90
10
50
6
21
0
71
1.07
27870--27920
26
1.9
27
88
11
79
5
19
15
58
1.57
27872--27929
26
2.2
26
82
11
66
8
18
13
58
1.61
32078--32128
26
1.9
27
84
11
70
5
17
15
60
1.54
35393--35449
26
2.3
26
82
14
75
70
5
17
7
1.29
37105--37179
26
3.0
26
77
16
86
64
0
17
18
1.30
37105--37182
23
3.2
23
72
20
70
64
0
17
17
1.30
37589--37631
19
2.2
20
87
4
61
48
6
9
34
1.62
46728--46787
31
1.9
31
87
12
88
10
15
3
71
1.25
46739--46800
18
3.4
18
76
12
65
6
17
1
74
1.11
48529--48567
20
2.0
19
85
5
51
41
5
17
35
1.72
55191--55244
23
2.3
23
78
9
65
57
16
18
7
1.62
55201--55252
24
2.2
24
79
3
61
59
19
15
5
1.56
57691--57730
20
1.9
22
90
10
66
25
20
10
45
1.81
64685--65420
366
2.0
366
95
0
1312
30
14
25
30
1.95

Tables:   1

The End!