Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005642.1 Hibiscus syriacus cultivar Beakdansim tig00013155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55147

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7648--7679
2
16.0
2
100
0
64
50
0
0
50
1.00
11713--11792
2
44.0
2
74
18
50
40
0
0
60
0.97
11712--11800
33
2.8
31
82
17
103
40
0
0
59
0.97
12924--12976
3
17.3
3
81
11
63
67
0
0
32
0.91
12923--12976
27
2.0
26
89
3
81
68
0
0
31
0.90
17533--17611
23
3.5
22
72
6
61
27
22
24
25
2.00
19666--19694
15
1.9
15
100
0
58
41
37
6
13
1.72
21275--21314
20
2.0
21
85
5
55
25
17
10
47
1.78
21845--21876
6
5.3
6
96
0
55
15
34
12
37
1.85
25832--25894
23
2.8
22
80
4
81
23
23
30
22
1.99
28763--28813
19
2.7
19
85
8
70
25
15
35
23
1.94
28656--28815
65
2.5
65
79
3
180
27
15
26
30
1.96
29845--29888
21
2.1
21
86
0
61
43
15
34
6
1.74
30691--30754
21
3.0
21
77
4
67
29
6
42
21
1.78
35318--35357
21
1.9
21
85
10
55
35
10
2
52
1.48
37298--37332
18
2.0
17
88
5
52
28
14
22
34
1.93
37294--37456
65
2.5
64
83
3
211
26
15
26
30
1.96
37404--37454
19
2.7
19
85
8
70
25
15
35
23
1.94
37298--37504
65
3.2
65
80
12
187
26
17
25
30
1.97
45801--45856
24
2.3
24
100
0
112
28
17
16
37
1.91
46081--46176
30
3.2
30
79
5
95
11
29
20
38
1.88

Tables:   1

The End!