Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005647.1 Hibiscus syriacus cultivar Beakdansim tig00013175_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56632

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2191--2294
33
3.1
33
82
9
95
30
36
1
30
1.69
6598--6652
24
2.3
24
75
9
60
67
10
14
7
1.41
12399--12430
14
2.3
14
100
0
64
34
6
31
28
1.82
17019--17200
90
2.0
91
86
1
258
21
27
22
28
1.99
21403--21584
90
2.0
91
90
1
285
21
26
23
28
1.99
22649--22683
17
2.0
17
88
5
52
62
0
25
11
1.28
33414--33492
26
3.0
26
96
0
149
27
12
29
30
1.93
35331--35362
11
2.9
11
90
0
55
28
43
0
28
1.55
37269--37312
23
1.9
23
85
0
61
40
4
22
31
1.74
38766--38894
59
2.2
59
87
0
177
27
18
25
27
1.98
38975--39078
44
2.3
44
86
6
138
37
6
22
33
1.80
39725--39777
23
2.3
23
100
0
106
43
28
5
22
1.76
39725--39793
23
3.0
23
89
4
77
40
27
8
23
1.84
41301--41334
2
17.5
2
87
6
52
50
0
2
47
1.16
44834--44872
18
2.2
18
85
0
60
43
7
23
25
1.80
46395--46451
5
12.0
5
90
5
84
0
17
0
82
0.67
46411--46473
23
2.7
23
82
2
63
4
9
3
82
0.92
46444--46480
20
1.9
20
94
5
67
13
0
5
81
0.86
54714--54798
32
2.6
31
75
17
75
16
17
1
64
1.35
54780--54812
16
2.0
17
88
5
50
9
21
0
69
1.15

Tables:   1

The End!