Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005649.1 Hibiscus syriacus cultivar Beakdansim tig00013197_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70998

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3316--3386
28
2.4
30
95
4
128
42
11
15
30
1.82
21470--21500
6
5.2
6
100
0
62
32
32
35
0
1.58
24517--24544
10
2.8
10
100
0
56
10
28
10
50
1.71
28771--28797
14
1.9
14
100
0
54
0
44
3
51
1.19
38448--38487
22
1.9
20
90
10
62
45
2
0
52
1.14
39774--39811
20
1.9
20
89
10
60
23
0
0
76
0.79
39844--39886
22
2.1
22
87
12
65
11
18
0
69
1.17
40938--40969
10
3.2
10
90
0
55
18
3
0
78
0.89
50384--50427
16
2.8
16
93
3
72
93
0
6
0
0.36
50384--50427
15
2.9
15
93
6
72
93
0
6
0
0.36
50384--50419
1
36.0
1
94
0
63
97
0
2
0
0.18
51226--51859
105
6.0
105
96
0
1178
33
25
18
22
1.97
51917--51957
20
2.0
20
85
0
55
21
19
19
39
1.93
52177--52216
22
1.9
20
90
10
62
45
2
0
52
1.14
53502--53539
20
1.9
20
89
10
60
23
0
0
76
0.79
53572--53614
22
2.1
22
87
12
65
11
18
0
69
1.17
56868--56981
60
1.9
60
88
0
174
34
18
11
35
1.87
60131--60186
24
2.3
24
81
0
67
14
12
25
48
1.78
60146--60201
24
2.3
24
87
0
76
16
12
17
53
1.73
61183--61315
64
2.1
63
81
10
148
33
18
21
26
1.96
61886--61956
18
3.8
18
72
17
65
21
15
30
32
1.94
70206--70235
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!