Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005663.1 Hibiscus syriacus cultivar Beakdansim tig00013240_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67427

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6676--6716
10
4.0
10
82
17
57
12
9
0
78
0.98
6676--6716
9
3.9
11
84
15
52
12
9
0
78
0.98
12149--12247
43
2.3
42
76
8
110
34
23
16
26
1.95
12220--12364
43
3.3
44
73
10
127
33
20
16
29
1.95
18743--18788
6
7.3
6
80
9
56
47
19
2
30
1.61
18741--18787
14
3.5
13
80
11
51
48
19
2
29
1.60
18743--18794
18
2.7
20
85
5
63
46
21
3
28
1.69
18743--18800
18
3.1
18
82
5
62
44
22
5
27
1.74
18802--18846
6
7.5
6
87
0
54
35
33
13
17
1.89
18757--18849
12
7.8
12
82
0
69
40
27
9
21
1.84
26047--26107
30
2.0
30
83
0
77
36
26
19
18
1.94
32803--32829
13
2.1
13
100
0
54
29
22
22
25
1.99
38452--38523
32
2.2
32
87
0
108
47
6
8
37
1.61
39664--39762
49
2.0
50
96
2
182
32
16
28
23
1.96
39805--39837
15
2.2
15
100
0
66
51
6
6
36
1.51
47084--47147
2
32.0
2
100
0
128
50
0
0
50
1.00
52865--52912
19
2.5
20
86
3
62
47
6
14
31
1.69
57814--57874
2
32.0
2
90
9
101
50
0
0
49
1.00
57814--57874
23
2.8
21
90
9
104
50
0
0
49
1.00
57889--58015
36
3.5
36
83
4
112
42
5
9
42
1.60
57926--58015
36
2.4
36
90
7
137
47
4
5
42
1.47
58042--58090
4
12.2
4
76
23
50
20
2
0
77
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58038--58090
18
3.0
19
81
15
69
20
1
0
77
0.87
62114--62160
15
3.1
15
90
0
67
27
6
19
46
1.74

Tables:   1

The End!