Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005669.1 Hibiscus syriacus cultivar Beakdansim tig00013258_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42103

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2536--2665
30
4.4
30
92
2
203
32
25
20
22
1.98
2536--2682
60
2.5
60
85
3
192
33
25
20
21
1.97
3587--3702
61
1.9
60
85
7
162
25
19
19
35
1.96
5712--5871
85
1.9
85
94
0
284
21
19
20
38
1.94
6334--6395
30
2.1
30
90
0
97
35
25
20
17
1.95
11596--11635
21
1.9
21
89
0
62
60
2
10
27
1.42
14427--14481
16
3.3
16
78
9
65
40
0
0
60
0.97
14437--14490
25
2.2
26
83
10
76
38
0
0
61
0.96
14751--14785
18
1.9
18
88
11
54
20
0
25
54
1.45
16572--16599
3
9.3
3
100
0
56
0
32
0
67
0.91
27275--27354
39
2.1
38
90
6
126
32
20
12
35
1.90
28007--28034
2
14.0
2
100
0
56
50
0
0
50
1.00
41555--41692
32
4.4
32
83
8
185
52
0
9
36
1.39
41573--41697
65
1.9
65
98
0
241
56
0
8
36
1.29

Tables:   1

The End!