Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000567.1 Hibiscus syriacus cultivar Beakdansim tig00001108_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69117

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1381--1418
20
2.0
20
89
5
60
34
5
0
60
1.19
2372--2422
25
2.0
24
81
7
57
37
17
0
45
1.49
2700--2779
35
2.3
35
88
0
124
42
25
0
32
1.55
2700--2795
35
2.7
34
80
6
102
40
27
1
31
1.63
3604--3663
23
2.7
22
78
19
63
35
28
13
23
1.92
5153--5418
145
1.8
148
92
2
457
35
6
10
46
1.66
5916--5996
35
2.3
36
87
6
112
34
1
23
40
1.63
17455--17492
20
1.9
20
94
0
67
26
21
18
34
1.96
24774--24818
23
2.0
23
100
0
90
22
8
20
48
1.76
25368--25411
18
2.5
18
77
3
54
40
9
11
38
1.73
31651--31699
21
2.3
21
89
0
71
28
30
14
26
1.95
35962--36081
35
3.5
35
80
6
147
25
16
29
28
1.97
51666--51750
42
2.0
42
93
0
143
17
17
17
47
1.84
51664--51758
42
2.3
42
88
1
138
16
15
17
49
1.80
52106--52161
14
3.8
15
73
17
55
53
0
1
44
1.11
52120--52221
22
4.7
22
70
20
63
50
1
0
47
1.19
52120--52169
16
3.3
15
80
8
50
50
0
0
50
1.00
52510--52552
14
3.1
14
86
0
59
34
18
11
34
1.87
52553--52617
15
4.4
16
77
14
68
35
16
4
43
1.69
52553--52623
30
2.4
30
90
2
108
33
15
4
46
1.65
58690--58759
34
2.1
34
89
5
108
21
31
15
31
1.95
59108--59169
23
2.8
22
87
4
90
12
29
38
19
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67560--67608
20
2.4
20
82
3
62
16
36
28
18
1.92

Tables:   1

The End!