Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005672.1 Hibiscus syriacus cultivar Beakdansim tig00013261_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82289

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
740--798
24
2.5
24
80
5
66
61
15
16
6
1.55
11703--11753
19
2.6
20
87
3
68
45
5
13
35
1.68
14888--14929
13
3.2
13
79
0
57
2
11
7
78
1.04
15222--15260
20
1.9
21
84
5
53
33
0
38
28
1.57
15599--15649
19
2.6
20
90
3
77
43
5
15
35
1.71
17560--17609
19
2.5
20
87
3
66
46
6
12
36
1.66
20615--20654
19
2.0
20
90
4
64
65
0
15
20
1.28
27402--27438
11
3.5
11
92
3
58
21
32
13
32
1.92
30494--30572
35
2.1
40
84
11
105
5
18
2
73
1.13
30516--30572
18
2.8
20
73
21
57
3
21
1
73
1.07
30843--30882
19
2.0
20
85
4
55
65
0
12
22
1.26
38337--38382
24
2.0
23
91
8
76
6
13
17
63
1.50
38343--38395
24
2.3
24
84
12
67
7
16
13
62
1.53
42809--42867
19
3.1
19
97
2
109
67
0
15
16
1.23
43282--43324
19
2.2
20
87
4
61
48
6
9
34
1.62
46541--46589
13
3.7
13
80
20
57
6
12
4
77
1.09
46857--46896
19
2.0
20
90
4
64
65
0
15
20
1.28
47307--47349
19
2.2
20
87
4
61
48
4
11
34
1.60
58973--59006
18
1.9
18
88
5
52
8
23
0
67
1.18
65489--65536
24
2.0
25
83
4
62
8
25
16
50
1.73
68690--68732
12
3.6
12
87
0
68
81
9
9
0
0.88
68941--68972
15
2.1
15
94
0
55
37
9
9
43
1.69

Tables:   1

The End!