Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005674.1 Hibiscus syriacus cultivar Beakdansim tig00013268_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52064

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12913--12965
24
2.3
24
83
6
65
7
16
15
60
1.57
14471--14514
18
2.4
18
96
0
79
18
13
34
34
1.90
15593--15634
11
3.7
12
87
3
52
14
11
0
73
1.09
21407--21447
16
2.7
15
82
10
57
82
12
4
0
0.81
21412--21476
24
2.7
25
83
6
82
76
12
6
4
1.12
24128--24213
43
2.0
43
97
0
163
45
13
9
31
1.76
26072--26096
10
2.5
10
100
0
50
92
8
0
0
0.40
26083--26133
16
2.9
17
82
11
59
76
11
7
3
1.13
28735--28820
43
2.0
43
100
0
172
46
13
9
30
1.75
30610--30648
12
3.5
11
86
13
53
69
0
12
17
1.19
38329--38367
12
3.5
11
86
13
53
69
0
12
17
1.19
44269--44317
18
2.6
19
87
6
64
77
6
12
4
1.09
47163--47189
11
2.5
11
100
0
54
25
48
0
25
1.52
47662--47724
33
1.9
32
84
9
83
58
1
26
12
1.43

Tables:   1

The End!