Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005684.1 Hibiscus syriacus cultivar Beakdansim tig00013295_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67521

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
649--691
20
2.2
20
82
0
50
23
9
32
34
1.87
9668--9744
39
2.0
39
81
0
91
12
36
14
36
1.84
25925--26015
3
29.7
3
80
4
92
40
2
0
57
1.11
27286--27323
19
2.1
19
95
5
69
18
5
5
71
1.25
32700--32727
2
14.0
2
100
0
56
50
0
0
50
1.00
33022--33061
1
40.0
1
84
0
53
92
0
7
0
0.38
33022--33067
10
4.4
10
91
8
74
89
0
10
0
0.50
33022--33067
11
4.3
11
94
2
76
89
0
10
0
0.50
33022--33067
21
2.2
21
96
0
83
89
0
10
0
0.50
35312--35780
83
5.7
83
93
3
795
26
13
22
37
1.91
35312--35780
249
1.9
248
96
1
877
26
13
22
37
1.91
38357--38411
22
2.5
22
87
0
83
34
14
14
36
1.87
39408--39468
17
3.4
17
70
27
54
50
6
22
19
1.70
38813--39948
113
10.0
114
92
3
1638
37
13
19
29
1.90
40171--40261
3
29.7
3
80
4
83
41
2
0
56
1.12
40169--40255
19
4.9
19
78
13
87
43
2
0
54
1.13
41529--41566
19
2.1
19
95
5
69
21
5
5
68
1.29
45481--45552
36
2.0
37
83
5
94
51
4
1
43
1.29
47416--47476
31
2.0
31
90
0
95
26
19
13
40
1.88
57963--57988
13
2.0
13
100
0
52
30
15
15
38
1.88

Tables:   1

The End!