Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005691.1 Hibiscus syriacus cultivar Beakdansim tig00013312_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71358

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
184--227
19
2.4
19
92
3
72
31
2
9
56
1.43
309--1904
196
8.1
199
94
4
2738
37
15
15
32
1.88
309--1904
395
4.1
395
94
4
2765
37
15
15
32
1.88
3368--3451
3
28.0
3
74
0
60
34
8
34
22
1.84
3356--3438
42
2.0
42
92
4
141
33
10
34
20
1.87
3356--3447
12
6.9
12
70
20
58
34
9
34
20
1.86
3364--3450
15
6.2
15
74
15
87
34
9
34
21
1.86
4912--5560
184
3.6
184
96
1
1175
35
14
15
34
1.88
13274--13317
20
2.2
20
88
4
63
29
22
9
38
1.85
16546--16580
16
2.2
16
100
0
70
31
31
0
37
1.58
20357--20387
2
15.5
2
100
0
62
51
0
0
48
1.00
27974--28019
11
4.5
10
84
10
58
17
2
17
63
1.42
27964--28019
21
2.7
20
83
8
67
16
1
19
62
1.41
29319--29367
14
3.8
14
79
20
70
8
12
24
55
1.64
29302--29374
24
3.0
24
97
0
137
8
12
24
54
1.64
30463--30513
16
3.3
15
84
10
68
11
7
17
62
1.51
34207--34249
21
2.0
21
90
0
68
23
13
18
44
1.86
34239--34285
21
2.2
21
80
0
58
25
21
23
29
1.99

Tables:   1

The End!