Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005694.1 Hibiscus syriacus cultivar Beakdansim tig00013320_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67050

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1844--1888
14
2.9
16
83
16
67
46
0
4
48
1.22
1848--1885
14
2.7
14
100
0
76
47
0
5
47
1.24
4834--4865
14
2.3
14
100
0
64
40
15
12
31
1.85
5559--5585
14
1.9
14
100
0
54
37
22
14
25
1.93
6537--6581
8
5.6
8
80
19
58
86
4
8
0
0.69
9320--9396
3
25.7
3
84
5
93
38
1
1
58
1.15
18005--18050
18
2.5
18
89
3
65
0
30
23
45
1.53
18015--18065
18
2.8
19
85
5
52
1
27
25
45
1.64
19633--19692
23
2.7
23
84
2
86
21
23
30
25
1.99
24650--25130
55
8.8
55
88
5
624
30
25
15
28
1.96
26493--26618
23
5.3
23
72
17
98
8
18
0
72
1.15
26494--26556
7
8.7
7
74
19
58
9
15
0
74
1.06
26492--26617
16
7.4
16
69
21
69
8
17
0
73
1.13
26502--26616
45
2.6
42
76
11
115
8
18
0
72
1.15
26533--26573
19
2.2
18
86
4
55
4
21
0
73
1.02
26588--26618
8
3.8
8
91
8
53
9
16
0
74
1.07
26498--26616
44
2.7
43
77
12
134
9
18
0
71
1.17
36277--36427
45
3.3
45
90
3
221
41
20
8
29
1.82
52458--52907
225
2.0
225
99
0
882
32
14
27
25
1.94

Tables:   1

The End!