Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005697.1 Hibiscus syriacus cultivar Beakdansim tig00013327_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  123928

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3188--3295
51
2.1
52
81
5
130
33
16
7
42
1.76
3205--3375
17
9.9
17
82
2
180
36
15
7
40
1.75
4087--4131
22
2.1
22
83
4
56
42
22
4
31
1.73
8360--8470
35
3.2
35
80
2
116
33
3
34
28
1.75
9172--9204
13
2.5
13
100
0
66
39
30
15
15
1.88
12247--12357
35
3.2
35
77
7
109
34
3
34
27
1.75
16118--16228
35
3.2
35
77
7
109
34
3
34
27
1.75
19557--19599
6
7.2
6
82
10
52
0
13
4
81
0.84
19989--20099
35
3.2
35
77
7
109
34
3
34
27
1.75
23376--23417
10
4.3
10
81
6
50
0
11
11
76
1.03
23799--23909
35
3.2
35
74
7
100
35
3
33
27
1.75
25612--25667
8
7.0
8
76
15
62
82
10
7
0
0.85
25624--25664
14
2.8
14
92
7
64
80
9
9
0
0.91
25616--25686
22
3.2
21
77
15
63
77
12
9
0
0.99
25640--25679
21
1.9
21
89
0
62
80
10
10
0
0.92
33014--33057
6
7.2
6
82
10
54
0
18
4
77
0.94
33015--33071
19
3.0
20
82
9
59
0
15
10
73
1.09
35823--35877
24
2.3
25
81
6
60
32
18
21
27
1.96
37797--37846
19
2.5
19
83
6
64
30
12
8
50
1.68
38731--38801
17
4.1
17
80
7
72
42
7
14
36
1.72
38774--38822
20
2.5
20
90
6
75
42
14
12
30
1.82
39637--39676
19
2.0
20
90
4
64
65
0
15
20
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42671--42728
24
2.2
26
79
14
66
44
8
6
39
1.62
44971--45050
18
4.6
17
70
27
62
3
17
5
73
1.16
44985--45043
13
4.7
12
78
15
57
1
18
3
76
1.02
44987--45043
19
2.9
19
71
23
55
1
19
3
75
1.04
55680--55722
23
1.9
21
81
13
50
32
18
13
34
1.90
76000--76035
2
18.0
2
100
0
72
50
0
0
50
1.00
80354--80414
30
1.9
33
84
15
85
18
24
0
57
1.40
80599--80646
21
2.1
21
81
11
51
79
2
10
8
1.02
80616--80654
14
2.9
14
84
3
53
84
0
7
7
0.77
80609--80650
14
2.9
15
82
10
52
83
0
9
7
0.81
80616--80649
7
4.9
7
85
0
50
85
0
5
8
0.75
80689--80721
10
3.4
10
87
8
50
84
0
12
3
0.72
86118--86166
19
2.5
20
90
3
73
44
8
12
34
1.71
87612--87641
13
2.4
13
94
5
53
43
0
30
26
1.55
89470--89502
14
2.4
14
90
5
50
24
48
0
27
1.51
90891--90923
6
5.7
6
89
3
50
9
33
0
57
1.30
94312--94363
19
2.6
21
90
6
81
46
7
13
32
1.72
98415--98466
19
2.6
21
90
6
81
46
7
13
32
1.72
103902--103952
19
2.6
20
90
3
77
43
5
15
35
1.71
108041--108091
19
2.6
20
90
3
77
43
5
15
35
1.71
114107--114305
105
1.9
105
93
0
344
34
18
21
26
1.96

Tables:   1

The End!