Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005699.1 Hibiscus syriacus cultivar Beakdansim tig00013329_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63463

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6428--6530
44
2.2
46
86
6
138
25
10
22
41
1.86
16227--16300
7
9.1
8
70
18
55
79
0
14
5
0.90
16194--16293
39
2.4
39
75
15
94
75
1
17
7
1.08
16224--16304
25
3.5
24
77
14
80
80
0
14
4
0.88
17620--18140
51
10.0
51
91
2
589
28
16
27
27
1.97
17787--18227
55
8.2
55
89
5
502
26
17
26
29
1.98
22417--22469
15
3.5
15
75
14
63
49
24
0
26
1.51
22432--22488
16
3.6
16
75
13
64
50
21
0
28
1.48
22412--22485
31
2.4
31
95
0
139
51
22
0
25
1.48
36839--36898
21
2.8
22
76
5
59
40
0
1
58
1.08
37668--37714
18
2.7
18
87
6
71
36
6
25
31
1.81
38291--38379
38
2.4
38
92
7
155
37
40
11
11
1.77
38551--38627
32
2.4
33
93
2
138
40
37
10
11
1.76
38306--38836
239
2.2
240
89
5
798
38
27
11
23
1.89
38297--38836
244
2.2
240
88
6
782
37
27
11
23
1.89
42955--43016
22
2.9
21
85
2
79
20
22
33
22
1.97
50181--50262
30
2.7
30
77
7
94
46
10
10
31
1.74
52401--52448
10
4.8
10
77
10
53
35
2
0
62
1.07
53210--53252
21
2.0
21
100
0
86
58
4
27
9
1.49
57654--57801
74
2.0
74
100
0
296
32
16
20
31
1.94
63217--63256
14
2.9
14
88
0
62
27
2
22
47
1.64

Tables:   1

The End!