Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000570.1 Hibiscus syriacus cultivar Beakdansim tig00001116_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81094

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6528--6553
2
13.0
2
100
0
52
50
0
0
50
1.00
12644--12833
103
1.8
103
88
2
292
45
17
13
23
1.84
19089--19132
21
2.1
21
95
0
79
36
20
9
34
1.84
21385--21432
2
24.5
2
95
4
89
52
0
0
47
1.00
29373--29446
18
3.9
18
81
10
94
20
21
31
27
1.98
29699--29734
2
18.0
2
94
0
63
47
0
0
52
1.00
36142--36215
18
3.9
18
77
10
76
20
17
31
31
1.96
36160--36199
21
1.9
21
89
0
62
25
15
27
32
1.95
42005--42089
16
5.5
15
76
6
64
34
20
7
38
1.79
43893--43923
16
1.9
16
100
0
62
38
0
12
48
1.42
44044--44149
22
4.9
22
85
1
151
27
23
29
19
1.98
46503--46542
20
2.0
20
95
0
71
55
5
22
17
1.61
52261--52300
19
2.0
20
85
9
55
30
32
12
25
1.92
52967--53068
50
2.0
50
94
0
177
37
13
8
40
1.76
56166--56201
11
3.4
11
96
3
65
8
25
8
58
1.55
56399--56507
19
5.7
19
98
0
209
26
21
31
21
1.98
56399--56523
19
6.7
17
95
2
61
26
20
30
22
1.98
63299--63338
21
1.9
21
85
10
55
35
10
2
52
1.48
65261--65309
19
2.7
17
84
9
53
26
20
28
24
1.99
65280--65440
65
2.5
65
84
7
195
29
18
21
30
1.97
68855--68891
17
2.2
17
100
0
74
21
37
10
29
1.88
73640--73689
15
3.3
15
85
0
64
14
66
12
8
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79461--79499
18
2.1
19
85
4
53
64
5
7
23
1.40

Tables:   1

The End!