Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005701.1 Hibiscus syriacus cultivar Beakdansim tig00013331_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57138

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3213--3270
25
2.3
23
78
21
64
48
1
0
50
1.11
3265--3323
21
2.7
21
78
17
59
49
1
0
49
1.11
3556--3620
25
2.4
27
75
17
73
43
13
3
40
1.60
3742--3847
29
3.6
30
77
7
101
37
12
7
42
1.71
11283--11362
4
20.0
4
89
0
106
26
6
23
43
1.77
12515--12764
132
1.9
131
88
0
374
33
18
11
37
1.86
13159--13205
24
2.0
25
87
8
71
29
2
2
65
1.15
13159--13207
23
2.1
24
85
11
66
30
2
2
65
1.15
26753--26795
22
2.0
22
85
0
59
37
11
30
20
1.89
28248--28274
14
1.9
14
100
0
54
51
22
18
7
1.70
32020--32166
59
2.5
60
81
5
165
31
19
4
44
1.71
37432--37473
11
3.7
11
81
12
50
66
2
0
30
1.04
37431--37475
21
2.0
23
91
8
76
62
2
0
35
1.08
38964--39029
32
2.1
32
91
5
107
39
19
7
33
1.80
43969--44007
20
2.0
20
85
10
53
33
7
15
43
1.75
44535--44579
21
2.1
21
87
0
63
48
28
6
15
1.70
54082--54140
30
2.0
30
82
0
73
20
11
13
54
1.70
54889--54952
31
2.1
31
88
5
94
60
14
3
21
1.47
56121--56157
18
2.1
18
89
0
56
35
2
0
62
1.10

Tables:   1

The End!