Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005703.1 Hibiscus syriacus cultivar Beakdansim tig00013337_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73275

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12268--12335
27
2.6
27
83
4
77
35
17
26
20
1.95
30902--30950
24
2.0
24
84
7
64
26
24
8
40
1.83
34067--34223
65
2.4
65
86
4
210
27
21
19
31
1.98
38297--38327
15
2.1
15
100
0
62
32
6
22
38
1.80
40013--40092
23
3.6
22
79
6
99
25
23
23
27
2.00
40501--40528
2
14.0
2
100
0
56
50
0
0
50
1.00
42014--42043
16
1.9
15
93
6
51
16
0
30
53
1.44
42817--42915
46
2.2
46
86
0
135
27
20
19
33
1.96
43638--43682
21
2.1
22
83
4
56
37
8
11
42
1.72
45588--45621
15
2.2
16
89
5
52
58
0
5
35
1.22
49513--49577
33
1.9
34
87
3
96
21
29
20
29
1.98
49942--49982
20
2.0
20
95
0
73
26
19
21
31
1.97
50987--51043
22
2.5
22
86
8
71
22
12
21
43
1.85
51608--51647
18
2.2
19
86
8
57
52
10
5
32
1.56
57696--57799
23
4.7
23
91
4
162
21
33
25
19
1.97
57715--57822
23
4.8
22
87
6
128
22
35
25
17
1.95
61998--62042
2
22.5
2
100
0
90
48
0
0
51
1.00
67699--67755
21
2.7
21
72
2
51
8
15
7
68
1.37
69057--69167
34
3.3
34
78
5
118
18
10
28
42
1.83
70810--70849
20
2.0
21
85
14
57
42
5
7
45
1.54
71091--71213
64
1.9
64
91
1
203
30
24
17
28
1.97

Tables:   1

The End!