Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005705.1 Hibiscus syriacus cultivar Beakdansim tig00013340_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75003

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5292--5374
4
20.0
4
71
7
58
63
0
4
31
1.15
5339--5376
17
2.2
17
95
0
67
73
0
0
26
0.83
5928--6147
111
2.0
109
91
1
359
38
10
7
44
1.66
6226--6304
25
3.2
25
62
13
63
39
13
5
41
1.67
6216--6317
50
2.0
50
100
0
204
37
14
3
44
1.64
8536--8609
31
2.4
31
86
0
94
28
21
10
39
1.87
10214--10291
31
2.5
31
91
0
129
26
25
11
35
1.90
10983--11022
10
4.0
10
86
0
53
27
32
0
40
1.57
11068--11101
9
3.9
9
84
7
52
35
0
2
61
1.11
11067--11105
17
2.4
17
95
4
71
33
0
5
61
1.18
11067--11113
17
2.8
17
90
3
60
31
2
4
61
1.27
13419--13503
35
2.5
33
76
14
82
27
7
10
55
1.60
17745--17792
3
16.0
3
100
0
96
66
0
0
33
0.92
28510--28561
10
4.9
11
81
6
63
19
25
30
25
1.98
28510--28561
21
2.5
21
96
0
95
19
25
30
25
1.98
31711--32852
571
2.0
571
99
0
2266
35
13
23
26
1.92
32858--33184
163
2.0
163
100
0
654
16
22
28
32
1.96
34501--34566
30
2.2
30
86
0
87
15
28
19
36
1.92
42894--42932
2
20.0
2
94
5
71
51
0
0
48
1.00
45466--45511
24
1.9
24
90
0
74
52
17
2
28
1.56
74447--74520
21
3.5
21
86
0
103
20
21
35
22
1.96
74556--74623
21
3.3
21
87
2
93
26
11
29
32
1.92

Tables:   1

The End!