Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005713.1 Hibiscus syriacus cultivar Beakdansim tig00013354_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74783

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5348--5435
42
2.1
42
91
0
140
28
11
43
17
1.83
5504--5596
38
2.5
37
84
5
132
52
0
0
47
1.00
6938--6987
24
2.1
23
85
3
64
34
34
12
20
1.89
7027--7060
16
2.1
17
88
5
52
0
17
5
76
0.98
10723--10756
18
1.9
18
88
5
52
50
0
20
29
1.49
20712--20755
20
2.2
20
92
4
72
36
11
25
27
1.90
21242--21284
16
2.7
16
100
0
86
46
0
0
53
1.00
21233--21285
16
2.8
20
72
27
60
45
0
1
52
1.11
21442--21490
20
2.5
20
84
12
66
61
2
8
28
1.36
23590--23622
15
2.2
15
94
0
57
6
15
69
9
1.34
25918--25976
31
1.9
31
85
0
82
45
0
5
49
1.24
29471--29544
37
2.0
37
84
5
96
48
1
5
44
1.34
33071--33105
16
2.1
17
94
5
63
31
8
25
34
1.86
33856--33888
15
2.1
16
88
5
50
51
15
24
9
1.72
41885--41983
43
2.4
42
81
6
112
27
21
17
34
1.95
41916--42012
43
2.3
43
85
3
133
20
23
21
34
1.97
43473--43647
92
1.9
93
92
1
298
36
25
22
15
1.93
45592--45637
23
2.0
22
83
8
56
65
0
0
34
0.93
46176--46201
13
2.0
13
100
0
52
69
7
0
23
1.14
53762--53818
2
28.5
2
100
0
114
50
0
0
49
1.00
54275--54349
23
3.2
23
73
1
69
42
9
16
32
1.79
55577--55603
13
2.1
13
100
0
54
62
0
0
37
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63679--63738
2
30.0
2
100
0
120
50
0
0
50
1.00
73713--73762
21
2.4
21
83
16
68
40
14
6
40
1.70

Tables:   1

The End!