Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005717.1 Hibiscus syriacus cultivar Beakdansim tig00013368_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63766

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1326--1532
104
2.0
103
94
0
360
25
24
16
32
1.96
2239--2314
19
4.1
17
70
18
53
44
3
1
50
1.29
2410--2435
5
5.2
5
100
0
52
19
0
0
80
0.71
2410--2443
15
2.3
15
89
0
50
23
2
0
73
0.97
7081--7141
20
3.0
20
90
0
86
37
21
19
21
1.94
7093--7147
20
2.5
22
77
17
69
38
21
20
20
1.94
10113--10148
14
2.6
14
100
0
72
25
5
8
61
1.46
30251--30302
10
5.0
10
81
4
50
0
19
1
78
0.84
30249--30303
18
3.0
18
85
15
69
0
20
3
76
0.94
33400--33465
31
2.1
31
85
0
87
30
19
16
33
1.94
33976--34000
13
1.9
13
100
0
50
8
0
20
72
1.10
35846--35872
13
2.1
13
100
0
54
48
14
0
37
1.45
41897--41939
21
2.0
21
82
8
52
27
13
4
53
1.60
48187--48216
14
2.1
14
100
0
60
76
0
0
23
0.78
55305--55362
25
2.3
25
96
0
107
48
8
24
18
1.76
58941--58992
25
2.1
25
82
7
61
48
0
26
25
1.52
62711--62756
18
2.5
18
96
3
83
34
13
6
45
1.69

Tables:   1

The End!