Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005723.1 Hibiscus syriacus cultivar Beakdansim tig00013378_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94900

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24156--24207
22
2.4
22
93
3
88
13
34
28
23
1.92
24211--24273
32
2.0
32
87
9
94
28
36
12
22
1.91
24844--24870
14
1.9
14
100
0
54
33
22
7
37
1.82
26305--26345
17
2.7
15
82
17
57
4
14
34
46
1.66
26468--26522
26
2.1
27
83
10
69
49
23
12
14
1.78
26749--26785
12
3.0
12
92
4
56
18
54
16
10
1.71
26801--26830
2
15.5
2
93
6
53
50
0
0
50
1.00
26882--26924
12
3.6
12
90
0
68
20
48
18
11
1.79
28948--28984
18
2.1
18
94
0
65
24
2
21
51
1.61
30049--30120
28
2.6
28
77
16
71
56
1
5
36
1.31
31504--31580
29
2.7
29
93
0
136
15
35
25
23
1.94
34162--34236
34
2.3
33
78
19
77
52
6
0
41
1.28
37640--37694
28
1.9
29
85
3
76
30
1
23
43
1.64
40639--40688
19
2.6
19
100
0
100
22
36
16
26
1.94
44610--44659
21
2.4
21
96
0
91
38
4
48
10
1.56
45795--45829
2
18.0
2
94
5
63
51
0
0
48
1.00
57493--57527
2
17.5
2
100
0
70
48
0
0
51
1.00
68176--68211
16
2.2
16
100
0
72
13
19
30
36
1.91
74851--74965
60
1.9
60
82
3
142
33
26
3
36
1.73
75083--75242
60
2.7
60
82
3
180
38
5
23
31
1.78
75136--75234
29
3.3
29
68
10
74
39
3
23
34
1.70
75451--75549
29
3.3
29
67
20
78
39
4
24
32
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75447--75579
60
2.2
60
90
4
207
39
4
22
33
1.74
75474--75557
29
2.8
29
72
15
82
40
5
19
34
1.76
74978--75610
315
2.0
316
95
0
1142
39
8
18
34
1.80
76760--76802
11
3.6
11
80
17
50
60
2
0
37
1.10
76760--76802
12
3.6
12
75
12
52
60
2
0
37
1.10
79209--79297
29
3.1
29
83
3
117
14
31
33
20
1.93
79349--79394
22
2.1
22
100
0
92
13
36
28
21
1.91
79398--79459
31
2.0
31
90
0
97
24
35
14
25
1.93

Tables:   1

The End!