Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005727.1 Hibiscus syriacus cultivar Beakdansim tig00013385_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69692

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--666
14
2.4
14
90
5
50
11
8
11
67
1.42
3332--3493
54
3.0
54
79
7
195
33
17
14
33
1.91
9524--9698
54
3.3
54
85
1
235
30
17
17
34
1.93
11107--11164
30
1.9
30
86
10
82
72
8
12
6
1.28
19556--19587
8
4.0
8
100
0
64
12
25
12
50
1.75
20114--20190
38
2.1
37
85
4
102
31
16
15
36
1.91
20561--20603
16
2.7
16
96
0
77
18
16
23
41
1.89
20994--21264
104
2.6
102
81
6
321
36
13
11
38
1.80
21395--22058
139
4.8
137
77
4
526
31
27
14
26
1.95
27493--27542
18
2.7
18
87
9
66
42
4
22
32
1.72
27960--28002
20
2.2
20
86
0
59
32
13
20
32
1.92
33060--33095
9
4.0
9
89
10
56
77
0
11
11
0.99
33060--33095
19
1.9
19
94
5
65
77
0
11
11
0.99
33374--33424
10
4.9
10
80
15
59
80
0
9
9
0.91
32827--33397
314
1.8
314
97
0
1088
36
11
20
30
1.88
33381--33420
12
3.4
12
83
16
57
85
0
7
7
0.76
33381--33411
13
2.4
13
94
0
53
83
0
6
9
0.79
33374--33420
23
2.1
22
88
7
69
82
0
8
8
0.83
40500--40552
14
3.8
14
77
5
54
9
7
3
79
1.05
40773--40799
6
4.5
6
100
0
54
44
0
0
55
0.99
45117--45145
14
2.1
14
100
0
58
55
6
17
20
1.65
48262--48307
22
2.1
22
95
0
83
39
21
0
39
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54157--54223
31
2.2
29
82
12
82
31
16
4
47
1.66
60125--60153
12
2.5
12
94
5
51
58
0
27
13
1.36
65443--65538
43
2.2
43
78
14
108
29
19
15
35
1.93
66277--66410
20
6.7
20
79
6
137
32
21
20
25
1.97
66277--66415
40
3.5
40
85
3
172
33
20
20
25
1.97
67213--67266
24
2.2
24
90
0
81
20
18
18
42
1.89
67441--67467
3
9.0
3
100
0
54
66
0
33
0
0.92
67459--67495
14
2.6
14
91
4
56
51
21
21
5
1.68
69488--69521
18
1.9
17
88
5
50
52
26
2
17
1.58

Tables:   1

The End!