Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005739.1 Hibiscus syriacus cultivar Beakdansim tig00013422_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51836

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--311
127
2.2
126
87
5
408
24
17
31
25
1.97
341--410
28
2.5
28
83
4
79
47
14
14
24
1.81
717--794
29
2.7
29
80
4
77
46
10
12
30
1.75
5086--5147
32
1.9
32
86
0
88
61
9
12
16
1.56
20496--20553
26
2.2
27
78
3
64
58
3
3
34
1.32
21419--21456
19
2.0
20
94
5
69
44
2
0
52
1.14
20891--22994
727
2.9
728
83
5
2605
37
11
14
36
1.82
24658--24879
43
5.2
43
73
8
175
37
19
19
23
1.94
24662--24879
84
2.6
84
78
8
226
36
19
19
23
1.95
29396--29523
40
3.1
41
85
4
179
32
15
23
28
1.95
29396--29523
41
3.1
41
87
2
186
32
15
23
28
1.95
30948--31039
45
2.0
45
93
0
157
27
23
18
30
1.98
46114--46510
132
3.0
130
83
3
483
41
15
10
32
1.81
46114--46510
131
3.0
131
83
2
492
41
15
10
32
1.81
46950--47025
26
3.0
25
88
5
109
68
10
6
14
1.38
46984--47101
63
1.9
62
85
5
166
57
10
12
19
1.63
47544--47593
3
16.3
3
87
4
73
34
0
4
62
1.14
48922--48992
28
2.6
28
77
6
74
33
7
2
56
1.41

Tables:   1

The End!