Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005742.1 Hibiscus syriacus cultivar Beakdansim tig00013429_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70378

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9568--9609
22
1.9
22
85
9
59
61
4
16
16
1.50
22884--22918
17
2.1
17
94
0
61
34
14
0
51
1.42
25096--25152
30
2.0
28
83
16
73
45
7
3
43
1.48
26722--26766
19
2.4
19
96
0
81
28
13
42
15
1.85
38050--38103
26
2.1
26
89
6
83
25
12
25
35
1.92
62443--62484
2
21.5
2
90
4
68
50
0
2
47
1.14
64796--64840
23
2.0
23
81
0
54
37
40
0
22
1.54
69707--69824
17
6.9
17
73
14
84
75
0
16
7
1.02
69707--69824
8
13.9
8
79
13
76
75
0
16
7
1.02
69707--69811
43
2.4
42
82
4
120
74
0
18
7
1.05
69713--69824
26
4.4
25
76
15
88
75
0
16
8
1.02

Tables:   1

The End!