Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005747.1 Hibiscus syriacus cultivar Beakdansim tig00013442_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63890

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5940--6323
127
3.0
127
96
0
709
22
20
18
38
1.94
15497--15533
18
2.1
18
89
0
56
13
43
13
29
1.82
18459--18584
32
3.9
32
78
6
130
15
11
34
38
1.84
20912--20944
2
16.5
2
100
0
66
48
0
0
51
1.00
22656--22705
26
1.9
26
87
0
73
30
14
6
50
1.66
25854--25946
39
2.4
41
85
8
131
44
10
11
33
1.76
25854--25949
40
2.5
40
86
8
135
43
10
11
34
1.75
25908--25989
24
3.4
23
73
9
67
39
13
14
32
1.85
29884--30087
38
5.4
37
73
22
135
44
4
7
43
1.53
29899--29994
44
2.2
43
85
9
124
45
4
5
44
1.45
29996--30020
11
2.3
11
100
0
50
40
8
8
44
1.63
29945--30138
71
2.7
72
82
8
207
42
4
9
43
1.57
30170--30237
3
21.3
3
79
19
52
29
0
1
69
0.98
30162--30234
26
3.0
25
78
15
89
31
0
1
67
1.00
31455--31497
22
2.0
22
86
9
61
18
2
2
76
1.00
31469--31498
13
2.2
14
94
5
53
20
0
3
76
0.92
33469--33514
19
2.4
19
88
0
65
15
13
6
65
1.46
36847--37317
84
5.7
81
85
6
524
30
24
20
24
1.99
36847--37320
164
2.9
161
82
6
562
30
24
20
24
1.99
36847--37317
248
1.9
244
89
3
721
30
24
20
24
1.99
36956--37379
84
5.2
80
85
5
201
31
23
20
24
1.98
37980--38246
38
7.2
37
73
18
195
43
4
8
43
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38086--38110
11
2.3
11
100
0
50
40
8
8
44
1.63
37980--38246
73
3.6
73
79
10
242
43
4
8
43
1.54
38251--38309
29
1.9
32
86
10
88
33
0
1
64
1.04
39544--39586
22
2.0
22
86
9
61
18
2
2
76
1.00
39558--39587
13
2.2
14
94
5
53
20
0
3
76
0.92
41905--41947
20
2.2
20
86
0
59
34
13
16
34
1.88
49646--49686
21
2.0
21
90
0
64
14
21
0
63
1.30
51529--51559
16
2.0
16
93
6
55
29
0
45
25
1.54
51955--51997
20
2.2
20
86
0
59
34
13
16
34
1.88

Tables:   1

The End!